Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2937788354;88355;88356 chr2:178557025;178557024;178557023chr2:179421752;179421751;179421750
N2AB2773683431;83432;83433 chr2:178557025;178557024;178557023chr2:179421752;179421751;179421750
N2A2680980650;80651;80652 chr2:178557025;178557024;178557023chr2:179421752;179421751;179421750
N2B2031261159;61160;61161 chr2:178557025;178557024;178557023chr2:179421752;179421751;179421750
Novex-12043761534;61535;61536 chr2:178557025;178557024;178557023chr2:179421752;179421751;179421750
Novex-22050461735;61736;61737 chr2:178557025;178557024;178557023chr2:179421752;179421751;179421750
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-102
  • Domain position: 43
  • Structural Position: 50
  • Q(SASA): 0.3666
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs908918470 -1.617 0.901 N 0.517 0.177 0.593429312994 gnomAD-2.1.1 4.02E-06 None None None None N None 6.46E-05 0 None 0 0 None 0 None 0 0 0
L/F rs908918470 -1.617 0.901 N 0.517 0.177 0.593429312994 gnomAD-3.1.2 6.57E-06 None None None None N None 2.41E-05 0 0 0 0 None 0 0 0 0 0
L/F rs908918470 -1.617 0.901 N 0.517 0.177 0.593429312994 gnomAD-4.0.0 3.84335E-06 None None None None N None 5.07271E-05 0 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.3709 ambiguous 0.32 benign -2.059 Highly Destabilizing 0.415 N 0.443 neutral None None None None N
L/C 0.5258 ambiguous 0.4852 ambiguous -1.121 Destabilizing 0.996 D 0.575 neutral None None None None N
L/D 0.8666 likely_pathogenic 0.825 pathogenic -1.693 Destabilizing 0.961 D 0.675 neutral None None None None N
L/E 0.6629 likely_pathogenic 0.6101 pathogenic -1.673 Destabilizing 0.987 D 0.678 prob.neutral None None None None N
L/F 0.2075 likely_benign 0.1718 benign -1.446 Destabilizing 0.901 D 0.517 neutral N 0.476750836 None None N
L/G 0.6434 likely_pathogenic 0.5728 pathogenic -2.408 Highly Destabilizing 0.005 N 0.357 neutral None None None None N
L/H 0.3572 ambiguous 0.3159 benign -1.588 Destabilizing 0.995 D 0.678 prob.neutral N 0.513017054 None None N
L/I 0.0892 likely_benign 0.0915 benign -1.145 Destabilizing 0.008 N 0.18 neutral N 0.504416213 None None N
L/K 0.4624 ambiguous 0.4276 ambiguous -1.377 Destabilizing 0.961 D 0.642 neutral None None None None N
L/M 0.144 likely_benign 0.1392 benign -0.824 Destabilizing 0.923 D 0.514 neutral None None None None N
L/N 0.5216 ambiguous 0.4851 ambiguous -1.164 Destabilizing 0.961 D 0.68 prob.neutral None None None None N
L/P 0.7419 likely_pathogenic 0.6854 pathogenic -1.422 Destabilizing 0.983 D 0.679 prob.neutral N 0.494892653 None None N
L/Q 0.3134 likely_benign 0.2834 benign -1.368 Destabilizing 0.987 D 0.672 neutral None None None None N
L/R 0.3635 ambiguous 0.3249 benign -0.735 Destabilizing 0.983 D 0.666 neutral N 0.475483388 None None N
L/S 0.4255 ambiguous 0.3679 ambiguous -1.783 Destabilizing 0.775 D 0.592 neutral None None None None N
L/T 0.3254 likely_benign 0.3019 benign -1.656 Destabilizing 0.775 D 0.509 neutral None None None None N
L/V 0.106 likely_benign 0.1039 benign -1.422 Destabilizing 0.156 N 0.428 neutral N 0.440364735 None None N
L/W 0.4304 ambiguous 0.3822 ambiguous -1.529 Destabilizing 0.996 D 0.69 prob.neutral None None None None N
L/Y 0.4424 ambiguous 0.3844 ambiguous -1.344 Destabilizing 0.961 D 0.556 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.