Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29377 | 88354;88355;88356 | chr2:178557025;178557024;178557023 | chr2:179421752;179421751;179421750 |
N2AB | 27736 | 83431;83432;83433 | chr2:178557025;178557024;178557023 | chr2:179421752;179421751;179421750 |
N2A | 26809 | 80650;80651;80652 | chr2:178557025;178557024;178557023 | chr2:179421752;179421751;179421750 |
N2B | 20312 | 61159;61160;61161 | chr2:178557025;178557024;178557023 | chr2:179421752;179421751;179421750 |
Novex-1 | 20437 | 61534;61535;61536 | chr2:178557025;178557024;178557023 | chr2:179421752;179421751;179421750 |
Novex-2 | 20504 | 61735;61736;61737 | chr2:178557025;178557024;178557023 | chr2:179421752;179421751;179421750 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs908918470 | -1.617 | 0.901 | N | 0.517 | 0.177 | 0.593429312994 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/F | rs908918470 | -1.617 | 0.901 | N | 0.517 | 0.177 | 0.593429312994 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/F | rs908918470 | -1.617 | 0.901 | N | 0.517 | 0.177 | 0.593429312994 | gnomAD-4.0.0 | 3.84335E-06 | None | None | None | None | N | None | 5.07271E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3709 | ambiguous | 0.32 | benign | -2.059 | Highly Destabilizing | 0.415 | N | 0.443 | neutral | None | None | None | None | N |
L/C | 0.5258 | ambiguous | 0.4852 | ambiguous | -1.121 | Destabilizing | 0.996 | D | 0.575 | neutral | None | None | None | None | N |
L/D | 0.8666 | likely_pathogenic | 0.825 | pathogenic | -1.693 | Destabilizing | 0.961 | D | 0.675 | neutral | None | None | None | None | N |
L/E | 0.6629 | likely_pathogenic | 0.6101 | pathogenic | -1.673 | Destabilizing | 0.987 | D | 0.678 | prob.neutral | None | None | None | None | N |
L/F | 0.2075 | likely_benign | 0.1718 | benign | -1.446 | Destabilizing | 0.901 | D | 0.517 | neutral | N | 0.476750836 | None | None | N |
L/G | 0.6434 | likely_pathogenic | 0.5728 | pathogenic | -2.408 | Highly Destabilizing | 0.005 | N | 0.357 | neutral | None | None | None | None | N |
L/H | 0.3572 | ambiguous | 0.3159 | benign | -1.588 | Destabilizing | 0.995 | D | 0.678 | prob.neutral | N | 0.513017054 | None | None | N |
L/I | 0.0892 | likely_benign | 0.0915 | benign | -1.145 | Destabilizing | 0.008 | N | 0.18 | neutral | N | 0.504416213 | None | None | N |
L/K | 0.4624 | ambiguous | 0.4276 | ambiguous | -1.377 | Destabilizing | 0.961 | D | 0.642 | neutral | None | None | None | None | N |
L/M | 0.144 | likely_benign | 0.1392 | benign | -0.824 | Destabilizing | 0.923 | D | 0.514 | neutral | None | None | None | None | N |
L/N | 0.5216 | ambiguous | 0.4851 | ambiguous | -1.164 | Destabilizing | 0.961 | D | 0.68 | prob.neutral | None | None | None | None | N |
L/P | 0.7419 | likely_pathogenic | 0.6854 | pathogenic | -1.422 | Destabilizing | 0.983 | D | 0.679 | prob.neutral | N | 0.494892653 | None | None | N |
L/Q | 0.3134 | likely_benign | 0.2834 | benign | -1.368 | Destabilizing | 0.987 | D | 0.672 | neutral | None | None | None | None | N |
L/R | 0.3635 | ambiguous | 0.3249 | benign | -0.735 | Destabilizing | 0.983 | D | 0.666 | neutral | N | 0.475483388 | None | None | N |
L/S | 0.4255 | ambiguous | 0.3679 | ambiguous | -1.783 | Destabilizing | 0.775 | D | 0.592 | neutral | None | None | None | None | N |
L/T | 0.3254 | likely_benign | 0.3019 | benign | -1.656 | Destabilizing | 0.775 | D | 0.509 | neutral | None | None | None | None | N |
L/V | 0.106 | likely_benign | 0.1039 | benign | -1.422 | Destabilizing | 0.156 | N | 0.428 | neutral | N | 0.440364735 | None | None | N |
L/W | 0.4304 | ambiguous | 0.3822 | ambiguous | -1.529 | Destabilizing | 0.996 | D | 0.69 | prob.neutral | None | None | None | None | N |
L/Y | 0.4424 | ambiguous | 0.3844 | ambiguous | -1.344 | Destabilizing | 0.961 | D | 0.556 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.