Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29379 | 88360;88361;88362 | chr2:178557019;178557018;178557017 | chr2:179421746;179421745;179421744 |
N2AB | 27738 | 83437;83438;83439 | chr2:178557019;178557018;178557017 | chr2:179421746;179421745;179421744 |
N2A | 26811 | 80656;80657;80658 | chr2:178557019;178557018;178557017 | chr2:179421746;179421745;179421744 |
N2B | 20314 | 61165;61166;61167 | chr2:178557019;178557018;178557017 | chr2:179421746;179421745;179421744 |
Novex-1 | 20439 | 61540;61541;61542 | chr2:178557019;178557018;178557017 | chr2:179421746;179421745;179421744 |
Novex-2 | 20506 | 61741;61742;61743 | chr2:178557019;178557018;178557017 | chr2:179421746;179421745;179421744 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1285049057 | -0.071 | 0.005 | N | 0.104 | 0.168 | 0.236890367714 | gnomAD-2.1.1 | 6.37E-05 | None | None | None | None | N | None | 2.29516E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/N | rs1285049057 | -0.071 | 0.005 | N | 0.104 | 0.168 | 0.236890367714 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs1285049057 | -0.071 | 0.005 | N | 0.104 | 0.168 | 0.236890367714 | gnomAD-4.0.0 | 7.68677E-06 | None | None | None | None | N | None | 1.01458E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1193 | likely_benign | 0.0953 | benign | 0.086 | Stabilizing | 0.051 | N | 0.209 | neutral | N | 0.494161934 | None | None | N |
D/C | 0.4954 | ambiguous | 0.4183 | ambiguous | -0.184 | Destabilizing | 0.998 | D | 0.371 | neutral | None | None | None | None | N |
D/E | 0.1099 | likely_benign | 0.0994 | benign | -0.419 | Destabilizing | 0.625 | D | 0.277 | neutral | N | 0.444386475 | None | None | N |
D/F | 0.4829 | ambiguous | 0.3857 | ambiguous | -0.047 | Destabilizing | 0.991 | D | 0.383 | neutral | None | None | None | None | N |
D/G | 0.1241 | likely_benign | 0.1034 | benign | -0.01 | Destabilizing | 0.454 | N | 0.315 | neutral | N | 0.447272064 | None | None | N |
D/H | 0.2096 | likely_benign | 0.1716 | benign | 0.597 | Stabilizing | 0.966 | D | 0.289 | neutral | N | 0.472471648 | None | None | N |
D/I | 0.2896 | likely_benign | 0.2207 | benign | 0.267 | Stabilizing | 0.974 | D | 0.419 | neutral | None | None | None | None | N |
D/K | 0.2463 | likely_benign | 0.2067 | benign | 0.425 | Stabilizing | 0.067 | N | 0.206 | neutral | None | None | None | None | N |
D/L | 0.2758 | likely_benign | 0.2264 | benign | 0.267 | Stabilizing | 0.842 | D | 0.371 | neutral | None | None | None | None | N |
D/M | 0.4409 | ambiguous | 0.3783 | ambiguous | 0.013 | Stabilizing | 0.998 | D | 0.363 | neutral | None | None | None | None | N |
D/N | 0.0798 | likely_benign | 0.0714 | benign | 0.189 | Stabilizing | 0.005 | N | 0.104 | neutral | N | 0.457086413 | None | None | N |
D/P | 0.6167 | likely_pathogenic | 0.5572 | ambiguous | 0.225 | Stabilizing | 0.974 | D | 0.34 | neutral | None | None | None | None | N |
D/Q | 0.2221 | likely_benign | 0.1947 | benign | 0.179 | Stabilizing | 0.949 | D | 0.305 | neutral | None | None | None | None | N |
D/R | 0.2952 | likely_benign | 0.2495 | benign | 0.649 | Stabilizing | 0.728 | D | 0.339 | neutral | None | None | None | None | N |
D/S | 0.0943 | likely_benign | 0.0823 | benign | 0.111 | Stabilizing | 0.172 | N | 0.189 | neutral | None | None | None | None | N |
D/T | 0.1658 | likely_benign | 0.1401 | benign | 0.192 | Stabilizing | 0.728 | D | 0.279 | neutral | None | None | None | None | N |
D/V | 0.1749 | likely_benign | 0.1361 | benign | 0.225 | Stabilizing | 0.801 | D | 0.363 | neutral | N | 0.470269602 | None | None | N |
D/W | 0.812 | likely_pathogenic | 0.7434 | pathogenic | -0.032 | Destabilizing | 0.998 | D | 0.471 | neutral | None | None | None | None | N |
D/Y | 0.1995 | likely_benign | 0.1585 | benign | 0.173 | Stabilizing | 0.989 | D | 0.38 | neutral | N | 0.500237142 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.