Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2939 | 9040;9041;9042 | chr2:178769766;178769765;178769764 | chr2:179634493;179634492;179634491 |
N2AB | 2939 | 9040;9041;9042 | chr2:178769766;178769765;178769764 | chr2:179634493;179634492;179634491 |
N2A | 2939 | 9040;9041;9042 | chr2:178769766;178769765;178769764 | chr2:179634493;179634492;179634491 |
N2B | 2893 | 8902;8903;8904 | chr2:178769766;178769765;178769764 | chr2:179634493;179634492;179634491 |
Novex-1 | 2893 | 8902;8903;8904 | chr2:178769766;178769765;178769764 | chr2:179634493;179634492;179634491 |
Novex-2 | 2893 | 8902;8903;8904 | chr2:178769766;178769765;178769764 | chr2:179634493;179634492;179634491 |
Novex-3 | 2939 | 9040;9041;9042 | chr2:178769766;178769765;178769764 | chr2:179634493;179634492;179634491 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.285 | N | 0.523 | 0.249 | 0.560681312399 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.688 | likely_pathogenic | 0.5591 | ambiguous | -2.364 | Highly Destabilizing | 0.209 | N | 0.441 | neutral | None | None | None | None | N |
I/C | 0.7638 | likely_pathogenic | 0.7124 | pathogenic | -1.598 | Destabilizing | 0.991 | D | 0.495 | neutral | None | None | None | None | N |
I/D | 0.8937 | likely_pathogenic | 0.8503 | pathogenic | -2.29 | Highly Destabilizing | 0.39 | N | 0.533 | neutral | None | None | None | None | N |
I/E | 0.8023 | likely_pathogenic | 0.7265 | pathogenic | -2.193 | Highly Destabilizing | 0.561 | D | 0.515 | neutral | None | None | None | None | N |
I/F | 0.2662 | likely_benign | 0.2146 | benign | -1.498 | Destabilizing | 0.772 | D | 0.484 | neutral | N | 0.50712909 | None | None | N |
I/G | 0.8976 | likely_pathogenic | 0.8399 | pathogenic | -2.796 | Highly Destabilizing | 0.39 | N | 0.511 | neutral | None | None | None | None | N |
I/H | 0.5523 | ambiguous | 0.5098 | ambiguous | -2.028 | Highly Destabilizing | 0.901 | D | 0.535 | neutral | None | None | None | None | N |
I/K | 0.5946 | likely_pathogenic | 0.4998 | ambiguous | -1.791 | Destabilizing | 0.007 | N | 0.42 | neutral | None | None | None | None | N |
I/L | 0.1592 | likely_benign | 0.1127 | benign | -1.173 | Destabilizing | 0.029 | N | 0.326 | neutral | N | 0.490958679 | None | None | N |
I/M | 0.1353 | likely_benign | 0.0897 | benign | -0.982 | Destabilizing | 0.08 | N | 0.339 | neutral | N | 0.512916716 | None | None | N |
I/N | 0.4192 | ambiguous | 0.3463 | ambiguous | -1.775 | Destabilizing | 0.003 | N | 0.457 | neutral | D | 0.530081428 | None | None | N |
I/P | 0.9927 | likely_pathogenic | 0.9878 | pathogenic | -1.545 | Destabilizing | 0.965 | D | 0.569 | neutral | None | None | None | None | N |
I/Q | 0.5799 | likely_pathogenic | 0.4853 | ambiguous | -1.859 | Destabilizing | 0.818 | D | 0.574 | neutral | None | None | None | None | N |
I/R | 0.4887 | ambiguous | 0.407 | ambiguous | -1.227 | Destabilizing | 0.39 | N | 0.532 | neutral | None | None | None | None | N |
I/S | 0.5722 | likely_pathogenic | 0.4591 | ambiguous | -2.451 | Highly Destabilizing | 0.326 | N | 0.518 | neutral | N | 0.507638781 | None | None | N |
I/T | 0.4464 | ambiguous | 0.3271 | benign | -2.234 | Highly Destabilizing | 0.285 | N | 0.523 | neutral | N | 0.439923164 | None | None | N |
I/V | 0.1162 | likely_benign | 0.0804 | benign | -1.545 | Destabilizing | 0.001 | N | 0.185 | neutral | N | 0.47341656 | None | None | N |
I/W | 0.787 | likely_pathogenic | 0.7746 | pathogenic | -1.711 | Destabilizing | 0.991 | D | 0.573 | neutral | None | None | None | None | N |
I/Y | 0.5445 | ambiguous | 0.5065 | ambiguous | -1.502 | Destabilizing | 0.901 | D | 0.525 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.