Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29398 | 88417;88418;88419 | chr2:178556962;178556961;178556960 | chr2:179421689;179421688;179421687 |
N2AB | 27757 | 83494;83495;83496 | chr2:178556962;178556961;178556960 | chr2:179421689;179421688;179421687 |
N2A | 26830 | 80713;80714;80715 | chr2:178556962;178556961;178556960 | chr2:179421689;179421688;179421687 |
N2B | 20333 | 61222;61223;61224 | chr2:178556962;178556961;178556960 | chr2:179421689;179421688;179421687 |
Novex-1 | 20458 | 61597;61598;61599 | chr2:178556962;178556961;178556960 | chr2:179421689;179421688;179421687 |
Novex-2 | 20525 | 61798;61799;61800 | chr2:178556962;178556961;178556960 | chr2:179421689;179421688;179421687 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.349 | N | 0.319 | 0.083 | 0.151104730317 | gnomAD-4.0.0 | 6.8421E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7343E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1003 | likely_benign | 0.0865 | benign | -0.342 | Destabilizing | 0.349 | N | 0.319 | neutral | N | 0.496202162 | None | None | N |
S/C | 0.1623 | likely_benign | 0.1344 | benign | -0.382 | Destabilizing | 0.995 | D | 0.632 | neutral | N | 0.473676644 | None | None | N |
S/D | 0.4702 | ambiguous | 0.4221 | ambiguous | 0.497 | Stabilizing | 0.775 | D | 0.411 | neutral | None | None | None | None | N |
S/E | 0.5987 | likely_pathogenic | 0.5465 | ambiguous | 0.411 | Stabilizing | 0.775 | D | 0.399 | neutral | None | None | None | None | N |
S/F | 0.3393 | likely_benign | 0.2734 | benign | -0.994 | Destabilizing | 0.949 | D | 0.706 | prob.neutral | N | 0.469295324 | None | None | N |
S/G | 0.0928 | likely_benign | 0.0897 | benign | -0.434 | Destabilizing | 0.775 | D | 0.413 | neutral | None | None | None | None | N |
S/H | 0.3998 | ambiguous | 0.3607 | ambiguous | -0.834 | Destabilizing | 0.996 | D | 0.633 | neutral | None | None | None | None | N |
S/I | 0.3338 | likely_benign | 0.2716 | benign | -0.23 | Destabilizing | 0.858 | D | 0.641 | neutral | None | None | None | None | N |
S/K | 0.7115 | likely_pathogenic | 0.6584 | pathogenic | -0.276 | Destabilizing | 0.775 | D | 0.409 | neutral | None | None | None | None | N |
S/L | 0.1365 | likely_benign | 0.1125 | benign | -0.23 | Destabilizing | 0.633 | D | 0.552 | neutral | None | None | None | None | N |
S/M | 0.2666 | likely_benign | 0.2385 | benign | -0.159 | Destabilizing | 0.989 | D | 0.641 | neutral | None | None | None | None | N |
S/N | 0.1521 | likely_benign | 0.1408 | benign | -0.114 | Destabilizing | 0.775 | D | 0.422 | neutral | None | None | None | None | N |
S/P | 0.1198 | likely_benign | 0.1096 | benign | -0.24 | Destabilizing | 0.949 | D | 0.603 | neutral | N | 0.485081091 | None | None | N |
S/Q | 0.5636 | ambiguous | 0.5229 | ambiguous | -0.292 | Destabilizing | 0.961 | D | 0.527 | neutral | None | None | None | None | N |
S/R | 0.6659 | likely_pathogenic | 0.6109 | pathogenic | -0.126 | Destabilizing | 0.923 | D | 0.609 | neutral | None | None | None | None | N |
S/T | 0.0768 | likely_benign | 0.0692 | benign | -0.24 | Destabilizing | 0.001 | N | 0.173 | neutral | N | 0.352111032 | None | None | N |
S/V | 0.3016 | likely_benign | 0.2467 | benign | -0.24 | Destabilizing | 0.633 | D | 0.554 | neutral | None | None | None | None | N |
S/W | 0.4664 | ambiguous | 0.3893 | ambiguous | -1.017 | Destabilizing | 0.996 | D | 0.74 | deleterious | None | None | None | None | N |
S/Y | 0.2648 | likely_benign | 0.2233 | benign | -0.707 | Destabilizing | 0.949 | D | 0.707 | prob.neutral | N | 0.50982482 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.