Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2943 | 9052;9053;9054 | chr2:178769754;178769753;178769752 | chr2:179634481;179634480;179634479 |
N2AB | 2943 | 9052;9053;9054 | chr2:178769754;178769753;178769752 | chr2:179634481;179634480;179634479 |
N2A | 2943 | 9052;9053;9054 | chr2:178769754;178769753;178769752 | chr2:179634481;179634480;179634479 |
N2B | 2897 | 8914;8915;8916 | chr2:178769754;178769753;178769752 | chr2:179634481;179634480;179634479 |
Novex-1 | 2897 | 8914;8915;8916 | chr2:178769754;178769753;178769752 | chr2:179634481;179634480;179634479 |
Novex-2 | 2897 | 8914;8915;8916 | chr2:178769754;178769753;178769752 | chr2:179634481;179634480;179634479 |
Novex-3 | 2943 | 9052;9053;9054 | chr2:178769754;178769753;178769752 | chr2:179634481;179634480;179634479 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1316613829 | None | 1.0 | N | 0.792 | 0.537 | 0.55355060856 | gnomAD-4.0.0 | 1.5905E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1335 | likely_benign | 0.1522 | benign | -0.234 | Destabilizing | 0.999 | D | 0.506 | neutral | N | 0.478579388 | None | None | N |
T/C | 0.5218 | ambiguous | 0.5762 | pathogenic | -1.11 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
T/D | 0.9867 | likely_pathogenic | 0.9914 | pathogenic | -2.758 | Highly Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
T/E | 0.9813 | likely_pathogenic | 0.9881 | pathogenic | -2.636 | Highly Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
T/F | 0.9711 | likely_pathogenic | 0.9784 | pathogenic | -0.523 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
T/G | 0.8003 | likely_pathogenic | 0.835 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
T/H | 0.9655 | likely_pathogenic | 0.9785 | pathogenic | -0.824 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
T/I | 0.474 | ambiguous | 0.5912 | pathogenic | 0.345 | Stabilizing | 1.0 | D | 0.792 | deleterious | N | 0.492245975 | None | None | N |
T/K | 0.97 | likely_pathogenic | 0.9827 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
T/L | 0.3696 | ambiguous | 0.415 | ambiguous | 0.345 | Stabilizing | 0.999 | D | 0.672 | neutral | None | None | None | None | N |
T/M | 0.3568 | ambiguous | 0.452 | ambiguous | 0.166 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
T/N | 0.7869 | likely_pathogenic | 0.8473 | pathogenic | -1.4 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.631594757 | None | None | N |
T/P | 0.4602 | ambiguous | 0.5169 | ambiguous | 0.181 | Stabilizing | 1.0 | D | 0.802 | deleterious | N | 0.499916241 | None | None | N |
T/Q | 0.9546 | likely_pathogenic | 0.9694 | pathogenic | -1.424 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
T/R | 0.9452 | likely_pathogenic | 0.9649 | pathogenic | -0.429 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
T/S | 0.4029 | ambiguous | 0.4789 | ambiguous | -1.147 | Destabilizing | 0.999 | D | 0.54 | neutral | N | 0.502014931 | None | None | N |
T/V | 0.2512 | likely_benign | 0.3056 | benign | 0.181 | Stabilizing | 0.999 | D | 0.59 | neutral | None | None | None | None | N |
T/W | 0.9972 | likely_pathogenic | 0.9983 | pathogenic | -0.93 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/Y | 0.9816 | likely_pathogenic | 0.9888 | pathogenic | -0.352 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.