Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29452 | 88579;88580;88581 | chr2:178555105;178555104;178555103 | chr2:179419832;179419831;179419830 |
N2AB | 27811 | 83656;83657;83658 | chr2:178555105;178555104;178555103 | chr2:179419832;179419831;179419830 |
N2A | 26884 | 80875;80876;80877 | chr2:178555105;178555104;178555103 | chr2:179419832;179419831;179419830 |
N2B | 20387 | 61384;61385;61386 | chr2:178555105;178555104;178555103 | chr2:179419832;179419831;179419830 |
Novex-1 | 20512 | 61759;61760;61761 | chr2:178555105;178555104;178555103 | chr2:179419832;179419831;179419830 |
Novex-2 | 20579 | 61960;61961;61962 | chr2:178555105;178555104;178555103 | chr2:179419832;179419831;179419830 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs763288364 | -0.137 | 0.028 | N | 0.338 | 0.225 | 0.301455362545 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.23189E-04 | None | 0 | None | 0 | 0 | 0 |
Y/H | rs763288364 | -0.137 | 0.028 | N | 0.338 | 0.225 | 0.301455362545 | gnomAD-4.0.0 | 1.4322E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.49709E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6917 | likely_pathogenic | 0.7194 | pathogenic | -1.868 | Destabilizing | 0.915 | D | 0.377 | neutral | None | None | None | None | I |
Y/C | 0.1409 | likely_benign | 0.1826 | benign | -0.875 | Destabilizing | 0.997 | D | 0.44 | neutral | N | 0.392875511 | None | None | I |
Y/D | 0.7748 | likely_pathogenic | 0.7874 | pathogenic | -0.517 | Destabilizing | 0.966 | D | 0.475 | neutral | N | 0.430663108 | None | None | I |
Y/E | 0.8471 | likely_pathogenic | 0.8612 | pathogenic | -0.409 | Destabilizing | 0.949 | D | 0.442 | neutral | None | None | None | None | I |
Y/F | 0.1116 | likely_benign | 0.1119 | benign | -0.557 | Destabilizing | 0.012 | N | 0.168 | neutral | N | 0.363342038 | None | None | I |
Y/G | 0.676 | likely_pathogenic | 0.7229 | pathogenic | -2.192 | Highly Destabilizing | 0.974 | D | 0.482 | neutral | None | None | None | None | I |
Y/H | 0.2946 | likely_benign | 0.3202 | benign | -0.585 | Destabilizing | 0.028 | N | 0.338 | neutral | N | 0.412077347 | None | None | I |
Y/I | 0.5082 | ambiguous | 0.5327 | ambiguous | -0.894 | Destabilizing | 0.142 | N | 0.235 | neutral | None | None | None | None | I |
Y/K | 0.7712 | likely_pathogenic | 0.7966 | pathogenic | -1.06 | Destabilizing | 0.974 | D | 0.458 | neutral | None | None | None | None | I |
Y/L | 0.5199 | ambiguous | 0.5407 | ambiguous | -0.894 | Destabilizing | 0.525 | D | 0.343 | neutral | None | None | None | None | I |
Y/M | 0.6823 | likely_pathogenic | 0.6963 | pathogenic | -0.731 | Destabilizing | 0.974 | D | 0.434 | neutral | None | None | None | None | I |
Y/N | 0.5054 | ambiguous | 0.5296 | ambiguous | -1.542 | Destabilizing | 0.934 | D | 0.439 | neutral | N | 0.43048975 | None | None | I |
Y/P | 0.9795 | likely_pathogenic | 0.9813 | pathogenic | -1.213 | Destabilizing | 0.991 | D | 0.49 | neutral | None | None | None | None | I |
Y/Q | 0.674 | likely_pathogenic | 0.712 | pathogenic | -1.361 | Destabilizing | 0.974 | D | 0.433 | neutral | None | None | None | None | I |
Y/R | 0.6655 | likely_pathogenic | 0.6999 | pathogenic | -0.772 | Destabilizing | 0.974 | D | 0.452 | neutral | None | None | None | None | I |
Y/S | 0.5261 | ambiguous | 0.5612 | ambiguous | -2.053 | Highly Destabilizing | 0.966 | D | 0.435 | neutral | N | 0.430143033 | None | None | I |
Y/T | 0.6808 | likely_pathogenic | 0.7044 | pathogenic | -1.844 | Destabilizing | 0.974 | D | 0.446 | neutral | None | None | None | None | I |
Y/V | 0.4108 | ambiguous | 0.4334 | ambiguous | -1.213 | Destabilizing | 0.728 | D | 0.322 | neutral | None | None | None | None | I |
Y/W | 0.5369 | ambiguous | 0.5591 | ambiguous | -0.182 | Destabilizing | 0.998 | D | 0.447 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.