Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29462 | 88609;88610;88611 | chr2:178555075;178555074;178555073 | chr2:179419802;179419801;179419800 |
N2AB | 27821 | 83686;83687;83688 | chr2:178555075;178555074;178555073 | chr2:179419802;179419801;179419800 |
N2A | 26894 | 80905;80906;80907 | chr2:178555075;178555074;178555073 | chr2:179419802;179419801;179419800 |
N2B | 20397 | 61414;61415;61416 | chr2:178555075;178555074;178555073 | chr2:179419802;179419801;179419800 |
Novex-1 | 20522 | 61789;61790;61791 | chr2:178555075;178555074;178555073 | chr2:179419802;179419801;179419800 |
Novex-2 | 20589 | 61990;61991;61992 | chr2:178555075;178555074;178555073 | chr2:179419802;179419801;179419800 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.784 | N | 0.603 | 0.206 | 0.158396225186 | gnomAD-4.0.0 | 1.59121E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77593E-05 | None | 0 | 0 | 0 | 0 | 0 |
A/T | None | None | 0.425 | N | 0.59 | 0.131 | 0.128392430309 | gnomAD-4.0.0 | 1.5912E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5221 | ambiguous | 0.5748 | pathogenic | -0.726 | Destabilizing | 0.981 | D | 0.671 | neutral | None | None | None | None | N |
A/D | 0.9785 | likely_pathogenic | 0.9795 | pathogenic | -0.091 | Destabilizing | 0.975 | D | 0.751 | deleterious | N | 0.46141656 | None | None | N |
A/E | 0.9582 | likely_pathogenic | 0.9605 | pathogenic | -0.075 | Destabilizing | 0.828 | D | 0.693 | prob.neutral | None | None | None | None | N |
A/F | 0.6721 | likely_pathogenic | 0.6953 | pathogenic | -0.533 | Destabilizing | 0.003 | N | 0.505 | neutral | None | None | None | None | N |
A/G | 0.3232 | likely_benign | 0.3159 | benign | -0.799 | Destabilizing | 0.784 | D | 0.603 | neutral | N | 0.451573445 | None | None | N |
A/H | 0.9667 | likely_pathogenic | 0.9715 | pathogenic | -0.634 | Destabilizing | 0.981 | D | 0.774 | deleterious | None | None | None | None | N |
A/I | 0.3851 | ambiguous | 0.4233 | ambiguous | 0.058 | Stabilizing | 0.013 | N | 0.511 | neutral | None | None | None | None | N |
A/K | 0.9792 | likely_pathogenic | 0.9819 | pathogenic | -0.6 | Destabilizing | 0.828 | D | 0.692 | prob.neutral | None | None | None | None | N |
A/L | 0.3042 | likely_benign | 0.3485 | ambiguous | 0.058 | Stabilizing | 0.003 | N | 0.475 | neutral | None | None | None | None | N |
A/M | 0.445 | ambiguous | 0.477 | ambiguous | -0.24 | Destabilizing | 0.893 | D | 0.742 | deleterious | None | None | None | None | N |
A/N | 0.9454 | likely_pathogenic | 0.952 | pathogenic | -0.509 | Destabilizing | 0.981 | D | 0.759 | deleterious | None | None | None | None | N |
A/P | 0.9405 | likely_pathogenic | 0.9465 | pathogenic | -0.097 | Destabilizing | 0.975 | D | 0.728 | prob.delet. | N | 0.46141656 | None | None | N |
A/Q | 0.9412 | likely_pathogenic | 0.9481 | pathogenic | -0.51 | Destabilizing | 0.981 | D | 0.741 | deleterious | None | None | None | None | N |
A/R | 0.9556 | likely_pathogenic | 0.9628 | pathogenic | -0.433 | Destabilizing | 0.944 | D | 0.733 | prob.delet. | None | None | None | None | N |
A/S | 0.3521 | ambiguous | 0.3622 | ambiguous | -0.981 | Destabilizing | 0.784 | D | 0.601 | neutral | N | 0.492073273 | None | None | N |
A/T | 0.2554 | likely_benign | 0.2772 | benign | -0.83 | Destabilizing | 0.425 | N | 0.59 | neutral | N | 0.485704662 | None | None | N |
A/V | 0.1648 | likely_benign | 0.185 | benign | -0.097 | Destabilizing | 0.001 | N | 0.289 | neutral | N | 0.430328594 | None | None | N |
A/W | 0.9618 | likely_pathogenic | 0.9659 | pathogenic | -0.844 | Destabilizing | 0.995 | D | 0.791 | deleterious | None | None | None | None | N |
A/Y | 0.8946 | likely_pathogenic | 0.9043 | pathogenic | -0.392 | Destabilizing | 0.543 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.