Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29472 | 88639;88640;88641 | chr2:178555045;178555044;178555043 | chr2:179419772;179419771;179419770 |
N2AB | 27831 | 83716;83717;83718 | chr2:178555045;178555044;178555043 | chr2:179419772;179419771;179419770 |
N2A | 26904 | 80935;80936;80937 | chr2:178555045;178555044;178555043 | chr2:179419772;179419771;179419770 |
N2B | 20407 | 61444;61445;61446 | chr2:178555045;178555044;178555043 | chr2:179419772;179419771;179419770 |
Novex-1 | 20532 | 61819;61820;61821 | chr2:178555045;178555044;178555043 | chr2:179419772;179419771;179419770 |
Novex-2 | 20599 | 62020;62021;62022 | chr2:178555045;178555044;178555043 | chr2:179419772;179419771;179419770 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1700836863 | None | 0.989 | N | 0.771 | 0.693 | 0.778047502339 | gnomAD-4.0.0 | 1.59134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85799E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2173 | likely_benign | 0.2021 | benign | -2.162 | Highly Destabilizing | 0.992 | D | 0.692 | prob.neutral | None | None | None | None | N |
I/C | 0.7633 | likely_pathogenic | 0.7726 | pathogenic | -1.401 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
I/D | 0.952 | likely_pathogenic | 0.9458 | pathogenic | -1.935 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
I/E | 0.8535 | likely_pathogenic | 0.8393 | pathogenic | -1.826 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
I/F | 0.3525 | ambiguous | 0.3298 | benign | -1.353 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | D | 0.528486018 | None | None | N |
I/G | 0.8052 | likely_pathogenic | 0.79 | pathogenic | -2.605 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
I/H | 0.8694 | likely_pathogenic | 0.8558 | pathogenic | -1.843 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
I/K | 0.7059 | likely_pathogenic | 0.6697 | pathogenic | -1.69 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
I/L | 0.2175 | likely_benign | 0.2065 | benign | -0.952 | Destabilizing | 0.889 | D | 0.472 | neutral | N | 0.517748949 | None | None | N |
I/M | 0.1258 | likely_benign | 0.1176 | benign | -0.77 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | D | 0.538068293 | None | None | N |
I/N | 0.7395 | likely_pathogenic | 0.7308 | pathogenic | -1.682 | Destabilizing | 0.999 | D | 0.854 | deleterious | N | 0.516178345 | None | None | N |
I/P | 0.8519 | likely_pathogenic | 0.8306 | pathogenic | -1.329 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
I/Q | 0.7561 | likely_pathogenic | 0.739 | pathogenic | -1.719 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
I/R | 0.5987 | likely_pathogenic | 0.5528 | ambiguous | -1.189 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
I/S | 0.4225 | ambiguous | 0.4082 | ambiguous | -2.344 | Highly Destabilizing | 0.998 | D | 0.833 | deleterious | N | 0.515924855 | None | None | N |
I/T | 0.1337 | likely_benign | 0.1294 | benign | -2.098 | Highly Destabilizing | 0.989 | D | 0.771 | deleterious | N | 0.492958755 | None | None | N |
I/V | 0.0622 | likely_benign | 0.0636 | benign | -1.329 | Destabilizing | 0.333 | N | 0.205 | neutral | N | 0.447450997 | None | None | N |
I/W | 0.8984 | likely_pathogenic | 0.8761 | pathogenic | -1.552 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
I/Y | 0.79 | likely_pathogenic | 0.7664 | pathogenic | -1.316 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.