Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29484 | 88675;88676;88677 | chr2:178555009;178555008;178555007 | chr2:179419736;179419735;179419734 |
N2AB | 27843 | 83752;83753;83754 | chr2:178555009;178555008;178555007 | chr2:179419736;179419735;179419734 |
N2A | 26916 | 80971;80972;80973 | chr2:178555009;178555008;178555007 | chr2:179419736;179419735;179419734 |
N2B | 20419 | 61480;61481;61482 | chr2:178555009;178555008;178555007 | chr2:179419736;179419735;179419734 |
Novex-1 | 20544 | 61855;61856;61857 | chr2:178555009;178555008;178555007 | chr2:179419736;179419735;179419734 |
Novex-2 | 20611 | 62056;62057;62058 | chr2:178555009;178555008;178555007 | chr2:179419736;179419735;179419734 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.379 | N | 0.225 | 0.078 | 0.115124310173 | gnomAD-4.0.0 | 1.59155E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
N/S | None | None | 0.002 | N | 0.113 | 0.115 | 0.0762999501168 | gnomAD-4.0.0 | 2.05278E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69839E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2928 | likely_benign | 0.2195 | benign | -0.182 | Destabilizing | 0.25 | N | 0.311 | neutral | None | None | None | None | N |
N/C | 0.3413 | ambiguous | 0.2658 | benign | 0.363 | Stabilizing | 0.992 | D | 0.383 | neutral | None | None | None | None | N |
N/D | 0.1023 | likely_benign | 0.0875 | benign | 0.137 | Stabilizing | 0.334 | N | 0.255 | neutral | N | 0.420631676 | None | None | N |
N/E | 0.5163 | ambiguous | 0.3932 | ambiguous | 0.084 | Stabilizing | 0.617 | D | 0.219 | neutral | None | None | None | None | N |
N/F | 0.7603 | likely_pathogenic | 0.6537 | pathogenic | -0.685 | Destabilizing | 0.92 | D | 0.4 | neutral | None | None | None | None | N |
N/G | 0.2124 | likely_benign | 0.187 | benign | -0.314 | Destabilizing | 0.002 | N | 0.152 | neutral | None | None | None | None | N |
N/H | 0.168 | likely_benign | 0.1373 | benign | -0.391 | Destabilizing | 0.896 | D | 0.323 | neutral | N | 0.491995916 | None | None | N |
N/I | 0.5252 | ambiguous | 0.3929 | ambiguous | 0.071 | Stabilizing | 0.81 | D | 0.431 | neutral | N | 0.456301225 | None | None | N |
N/K | 0.4483 | ambiguous | 0.3301 | benign | 0.157 | Stabilizing | 0.379 | N | 0.225 | neutral | N | 0.472100646 | None | None | N |
N/L | 0.3941 | ambiguous | 0.3222 | benign | 0.071 | Stabilizing | 0.617 | D | 0.382 | neutral | None | None | None | None | N |
N/M | 0.5071 | ambiguous | 0.405 | ambiguous | 0.322 | Stabilizing | 0.992 | D | 0.338 | neutral | None | None | None | None | N |
N/P | 0.7562 | likely_pathogenic | 0.6469 | pathogenic | 0.012 | Stabilizing | 0.92 | D | 0.411 | neutral | None | None | None | None | N |
N/Q | 0.5113 | ambiguous | 0.4042 | ambiguous | -0.229 | Destabilizing | 0.85 | D | 0.331 | neutral | None | None | None | None | N |
N/R | 0.495 | ambiguous | 0.3686 | ambiguous | 0.2 | Stabilizing | 0.617 | D | 0.325 | neutral | None | None | None | None | N |
N/S | 0.0722 | likely_benign | 0.0675 | benign | 0.01 | Stabilizing | 0.002 | N | 0.113 | neutral | N | 0.375261959 | None | None | N |
N/T | 0.1204 | likely_benign | 0.1029 | benign | 0.083 | Stabilizing | 0.016 | N | 0.179 | neutral | N | 0.438257431 | None | None | N |
N/V | 0.4492 | ambiguous | 0.3398 | benign | 0.012 | Stabilizing | 0.617 | D | 0.42 | neutral | None | None | None | None | N |
N/W | 0.888 | likely_pathogenic | 0.8127 | pathogenic | -0.754 | Destabilizing | 0.992 | D | 0.425 | neutral | None | None | None | None | N |
N/Y | 0.3552 | ambiguous | 0.2619 | benign | -0.453 | Destabilizing | 0.963 | D | 0.359 | neutral | N | 0.456301225 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.