Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29488 | 88687;88688;88689 | chr2:178554997;178554996;178554995 | chr2:179419724;179419723;179419722 |
N2AB | 27847 | 83764;83765;83766 | chr2:178554997;178554996;178554995 | chr2:179419724;179419723;179419722 |
N2A | 26920 | 80983;80984;80985 | chr2:178554997;178554996;178554995 | chr2:179419724;179419723;179419722 |
N2B | 20423 | 61492;61493;61494 | chr2:178554997;178554996;178554995 | chr2:179419724;179419723;179419722 |
Novex-1 | 20548 | 61867;61868;61869 | chr2:178554997;178554996;178554995 | chr2:179419724;179419723;179419722 |
Novex-2 | 20615 | 62068;62069;62070 | chr2:178554997;178554996;178554995 | chr2:179419724;179419723;179419722 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | None | None | None | N | 0.163 | 0.229 | 0.538421760271 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.1616 | likely_benign | 0.1371 | benign | -0.954 | Destabilizing | 0.011 | N | 0.243 | neutral | None | None | None | None | N |
C/D | 0.339 | likely_benign | 0.2655 | benign | 0.025 | Stabilizing | 0.104 | N | 0.435 | neutral | None | None | None | None | N |
C/E | 0.4426 | ambiguous | 0.3642 | ambiguous | 0.083 | Stabilizing | 0.055 | N | 0.44 | neutral | None | None | None | None | N |
C/F | 0.0938 | likely_benign | 0.0813 | benign | -0.795 | Destabilizing | 0.602 | D | 0.51 | neutral | N | 0.419272679 | None | None | N |
C/G | 0.1143 | likely_benign | 0.0965 | benign | -1.194 | Destabilizing | 0.019 | N | 0.399 | neutral | N | 0.418752604 | None | None | N |
C/H | 0.1703 | likely_benign | 0.1444 | benign | -1.578 | Destabilizing | 0.667 | D | 0.507 | neutral | None | None | None | None | N |
C/I | 0.2136 | likely_benign | 0.1841 | benign | -0.383 | Destabilizing | 0.22 | N | 0.402 | neutral | None | None | None | None | N |
C/K | 0.3936 | ambiguous | 0.33 | benign | -0.111 | Destabilizing | 0.055 | N | 0.433 | neutral | None | None | None | None | N |
C/L | 0.2061 | likely_benign | 0.1781 | benign | -0.383 | Destabilizing | 0.104 | N | 0.366 | neutral | None | None | None | None | N |
C/M | 0.2903 | likely_benign | 0.2734 | benign | -0.097 | Destabilizing | 0.859 | D | 0.437 | neutral | None | None | None | None | N |
C/N | 0.1761 | likely_benign | 0.1532 | benign | -0.041 | Destabilizing | 0.055 | N | 0.451 | neutral | None | None | None | None | N |
C/P | 0.9309 | likely_pathogenic | 0.8568 | pathogenic | -0.546 | Destabilizing | 0.22 | N | 0.479 | neutral | None | None | None | None | N |
C/Q | 0.2786 | likely_benign | 0.2372 | benign | -0.068 | Destabilizing | 0.22 | N | 0.495 | neutral | None | None | None | None | N |
C/R | 0.1789 | likely_benign | 0.142 | benign | -0.167 | Destabilizing | 0.175 | N | 0.498 | neutral | N | 0.355970562 | None | None | N |
C/S | 0.0914 | likely_benign | 0.0814 | benign | -0.467 | Destabilizing | None | N | 0.163 | neutral | N | 0.328399958 | None | None | N |
C/T | 0.1258 | likely_benign | 0.1173 | benign | -0.244 | Destabilizing | 0.025 | N | 0.34 | neutral | None | None | None | None | N |
C/V | 0.1999 | likely_benign | 0.1779 | benign | -0.546 | Destabilizing | 0.104 | N | 0.379 | neutral | None | None | None | None | N |
C/W | 0.2756 | likely_benign | 0.2321 | benign | -0.859 | Destabilizing | 0.946 | D | 0.487 | neutral | N | 0.449075511 | None | None | N |
C/Y | 0.1382 | likely_benign | 0.1123 | benign | -0.669 | Destabilizing | 0.602 | D | 0.499 | neutral | N | 0.448728794 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.