Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29500 | 88723;88724;88725 | chr2:178554961;178554960;178554959 | chr2:179419688;179419687;179419686 |
N2AB | 27859 | 83800;83801;83802 | chr2:178554961;178554960;178554959 | chr2:179419688;179419687;179419686 |
N2A | 26932 | 81019;81020;81021 | chr2:178554961;178554960;178554959 | chr2:179419688;179419687;179419686 |
N2B | 20435 | 61528;61529;61530 | chr2:178554961;178554960;178554959 | chr2:179419688;179419687;179419686 |
Novex-1 | 20560 | 61903;61904;61905 | chr2:178554961;178554960;178554959 | chr2:179419688;179419687;179419686 |
Novex-2 | 20627 | 62104;62105;62106 | chr2:178554961;178554960;178554959 | chr2:179419688;179419687;179419686 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs761934380 | -0.954 | 0.005 | D | 0.299 | 0.374 | 0.585808247695 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.30745E-04 | None | 0 | 0 | 0 |
I/L | rs761934380 | -0.954 | 0.005 | D | 0.299 | 0.374 | 0.585808247695 | gnomAD-4.0.0 | 7.52669E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9946E-07 | 9.27472E-05 | 3.31334E-05 |
I/M | None | None | 0.976 | D | 0.697 | 0.749 | 0.716492818265 | gnomAD-4.0.0 | 6.84265E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99493E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9549 | likely_pathogenic | 0.9653 | pathogenic | -2.755 | Highly Destabilizing | 0.863 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/C | 0.9247 | likely_pathogenic | 0.9379 | pathogenic | -2.105 | Highly Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
I/D | 0.9948 | likely_pathogenic | 0.9958 | pathogenic | -2.932 | Highly Destabilizing | 0.997 | D | 0.852 | deleterious | None | None | None | None | N |
I/E | 0.9829 | likely_pathogenic | 0.9852 | pathogenic | -2.715 | Highly Destabilizing | 0.997 | D | 0.847 | deleterious | None | None | None | None | N |
I/F | 0.3769 | ambiguous | 0.4168 | ambiguous | -1.625 | Destabilizing | 0.976 | D | 0.733 | prob.delet. | D | 0.55136203 | None | None | N |
I/G | 0.9881 | likely_pathogenic | 0.9911 | pathogenic | -3.308 | Highly Destabilizing | 0.997 | D | 0.83 | deleterious | None | None | None | None | N |
I/H | 0.9572 | likely_pathogenic | 0.9636 | pathogenic | -2.647 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
I/K | 0.9572 | likely_pathogenic | 0.9627 | pathogenic | -2.304 | Highly Destabilizing | 0.997 | D | 0.833 | deleterious | None | None | None | None | N |
I/L | 0.1752 | likely_benign | 0.1926 | benign | -1.16 | Destabilizing | 0.005 | N | 0.299 | neutral | D | 0.530537943 | None | None | N |
I/M | 0.2036 | likely_benign | 0.2265 | benign | -1.095 | Destabilizing | 0.976 | D | 0.697 | prob.neutral | D | 0.573710557 | None | None | N |
I/N | 0.9393 | likely_pathogenic | 0.9508 | pathogenic | -2.603 | Highly Destabilizing | 0.996 | D | 0.851 | deleterious | D | 0.600661299 | None | None | N |
I/P | 0.9913 | likely_pathogenic | 0.9923 | pathogenic | -1.672 | Destabilizing | 0.997 | D | 0.853 | deleterious | None | None | None | None | N |
I/Q | 0.9444 | likely_pathogenic | 0.9524 | pathogenic | -2.48 | Highly Destabilizing | 0.997 | D | 0.848 | deleterious | None | None | None | None | N |
I/R | 0.9343 | likely_pathogenic | 0.9444 | pathogenic | -1.915 | Destabilizing | 0.997 | D | 0.852 | deleterious | None | None | None | None | N |
I/S | 0.9478 | likely_pathogenic | 0.9577 | pathogenic | -3.337 | Highly Destabilizing | 0.988 | D | 0.811 | deleterious | D | 0.584641938 | None | None | N |
I/T | 0.9472 | likely_pathogenic | 0.9569 | pathogenic | -2.971 | Highly Destabilizing | 0.92 | D | 0.695 | prob.neutral | D | 0.60025769 | None | None | N |
I/V | 0.169 | likely_benign | 0.1825 | benign | -1.672 | Destabilizing | 0.061 | N | 0.291 | neutral | D | 0.556341695 | None | None | N |
I/W | 0.9274 | likely_pathogenic | 0.9386 | pathogenic | -1.978 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
I/Y | 0.8815 | likely_pathogenic | 0.8977 | pathogenic | -1.736 | Destabilizing | 0.997 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.