Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29544 | 88855;88856;88857 | chr2:178554717;178554716;178554715 | chr2:179419444;179419443;179419442 |
N2AB | 27903 | 83932;83933;83934 | chr2:178554717;178554716;178554715 | chr2:179419444;179419443;179419442 |
N2A | 26976 | 81151;81152;81153 | chr2:178554717;178554716;178554715 | chr2:179419444;179419443;179419442 |
N2B | 20479 | 61660;61661;61662 | chr2:178554717;178554716;178554715 | chr2:179419444;179419443;179419442 |
Novex-1 | 20604 | 62035;62036;62037 | chr2:178554717;178554716;178554715 | chr2:179419444;179419443;179419442 |
Novex-2 | 20671 | 62236;62237;62238 | chr2:178554717;178554716;178554715 | chr2:179419444;179419443;179419442 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.014 | N | 0.194 | 0.065 | 0.151104730317 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.63 | likely_pathogenic | 0.6073 | pathogenic | -0.007 | Destabilizing | 0.86 | D | 0.579 | neutral | None | None | None | None | N |
K/C | 0.7967 | likely_pathogenic | 0.7961 | pathogenic | -0.292 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/D | 0.8757 | likely_pathogenic | 0.8698 | pathogenic | 0.105 | Stabilizing | 0.978 | D | 0.662 | neutral | None | None | None | None | N |
K/E | 0.4248 | ambiguous | 0.3838 | ambiguous | 0.116 | Stabilizing | 0.822 | D | 0.523 | neutral | N | 0.436113708 | None | None | N |
K/F | 0.9175 | likely_pathogenic | 0.9207 | pathogenic | -0.268 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/G | 0.7474 | likely_pathogenic | 0.751 | pathogenic | -0.194 | Destabilizing | 0.956 | D | 0.573 | neutral | None | None | None | None | N |
K/H | 0.4289 | ambiguous | 0.4221 | ambiguous | -0.443 | Destabilizing | 0.994 | D | 0.655 | neutral | None | None | None | None | N |
K/I | 0.5998 | likely_pathogenic | 0.5845 | pathogenic | 0.405 | Stabilizing | 0.978 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/L | 0.5359 | ambiguous | 0.5346 | ambiguous | 0.405 | Stabilizing | 0.956 | D | 0.573 | neutral | None | None | None | None | N |
K/M | 0.4363 | ambiguous | 0.4287 | ambiguous | 0.159 | Stabilizing | 0.997 | D | 0.649 | neutral | N | 0.485523808 | None | None | N |
K/N | 0.7379 | likely_pathogenic | 0.7236 | pathogenic | 0.175 | Stabilizing | 0.942 | D | 0.596 | neutral | N | 0.47844312 | None | None | N |
K/P | 0.9422 | likely_pathogenic | 0.9394 | pathogenic | 0.295 | Stabilizing | 0.993 | D | 0.684 | prob.neutral | None | None | None | None | N |
K/Q | 0.1838 | likely_benign | 0.1786 | benign | 0.034 | Stabilizing | 0.942 | D | 0.591 | neutral | N | 0.452045953 | None | None | N |
K/R | 0.0889 | likely_benign | 0.0961 | benign | -0.011 | Destabilizing | 0.014 | N | 0.194 | neutral | N | 0.480712634 | None | None | N |
K/S | 0.6735 | likely_pathogenic | 0.6521 | pathogenic | -0.311 | Destabilizing | 0.86 | D | 0.59 | neutral | None | None | None | None | N |
K/T | 0.3467 | ambiguous | 0.3177 | benign | -0.148 | Destabilizing | 0.942 | D | 0.624 | neutral | N | 0.41156198 | None | None | N |
K/V | 0.55 | ambiguous | 0.5282 | ambiguous | 0.295 | Stabilizing | 0.978 | D | 0.669 | neutral | None | None | None | None | N |
K/W | 0.8841 | likely_pathogenic | 0.9048 | pathogenic | -0.304 | Destabilizing | 0.998 | D | 0.746 | deleterious | None | None | None | None | N |
K/Y | 0.8105 | likely_pathogenic | 0.8173 | pathogenic | 0.067 | Stabilizing | 0.993 | D | 0.685 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.