Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29545 | 88858;88859;88860 | chr2:178554714;178554713;178554712 | chr2:179419441;179419440;179419439 |
N2AB | 27904 | 83935;83936;83937 | chr2:178554714;178554713;178554712 | chr2:179419441;179419440;179419439 |
N2A | 26977 | 81154;81155;81156 | chr2:178554714;178554713;178554712 | chr2:179419441;179419440;179419439 |
N2B | 20480 | 61663;61664;61665 | chr2:178554714;178554713;178554712 | chr2:179419441;179419440;179419439 |
Novex-1 | 20605 | 62038;62039;62040 | chr2:178554714;178554713;178554712 | chr2:179419441;179419440;179419439 |
Novex-2 | 20672 | 62239;62240;62241 | chr2:178554714;178554713;178554712 | chr2:179419441;179419440;179419439 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1302609593 | 0.15 | 0.988 | N | 0.424 | 0.297 | 0.3349148499 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1302609593 | 0.15 | 0.988 | N | 0.424 | 0.297 | 0.3349148499 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1302609593 | 0.15 | 0.988 | N | 0.424 | 0.297 | 0.3349148499 | gnomAD-4.0.0 | 2.56187E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.42377E-05 | None | 0 | 0 | 2.39263E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.101 | likely_benign | 0.0985 | benign | -0.62 | Destabilizing | 0.704 | D | 0.368 | neutral | N | 0.4303211 | None | None | N |
T/C | 0.5277 | ambiguous | 0.535 | ambiguous | -0.363 | Destabilizing | 0.999 | D | 0.448 | neutral | None | None | None | None | N |
T/D | 0.4958 | ambiguous | 0.4346 | ambiguous | 0.05 | Stabilizing | 0.939 | D | 0.405 | neutral | None | None | None | None | N |
T/E | 0.4306 | ambiguous | 0.3821 | ambiguous | 0.022 | Stabilizing | 0.939 | D | 0.375 | neutral | None | None | None | None | N |
T/F | 0.3792 | ambiguous | 0.3708 | ambiguous | -0.802 | Destabilizing | 0.997 | D | 0.476 | neutral | None | None | None | None | N |
T/G | 0.2857 | likely_benign | 0.2741 | benign | -0.842 | Destabilizing | 0.939 | D | 0.429 | neutral | None | None | None | None | N |
T/H | 0.3082 | likely_benign | 0.2937 | benign | -1.148 | Destabilizing | 0.999 | D | 0.453 | neutral | None | None | None | None | N |
T/I | 0.3188 | likely_benign | 0.3161 | benign | -0.134 | Destabilizing | 0.988 | D | 0.424 | neutral | N | 0.489678834 | None | None | N |
T/K | 0.3112 | likely_benign | 0.2907 | benign | -0.583 | Destabilizing | 0.079 | N | 0.134 | neutral | None | None | None | None | N |
T/L | 0.1453 | likely_benign | 0.1409 | benign | -0.134 | Destabilizing | 0.969 | D | 0.378 | neutral | None | None | None | None | N |
T/M | 0.0942 | likely_benign | 0.0978 | benign | 0.123 | Stabilizing | 0.999 | D | 0.427 | neutral | None | None | None | None | N |
T/N | 0.1241 | likely_benign | 0.1147 | benign | -0.432 | Destabilizing | 0.92 | D | 0.387 | neutral | N | 0.377449407 | None | None | N |
T/P | 0.582 | likely_pathogenic | 0.5738 | pathogenic | -0.264 | Destabilizing | 0.988 | D | 0.414 | neutral | N | 0.5180948 | None | None | N |
T/Q | 0.2847 | likely_benign | 0.2714 | benign | -0.63 | Destabilizing | 0.982 | D | 0.417 | neutral | None | None | None | None | N |
T/R | 0.2892 | likely_benign | 0.2715 | benign | -0.344 | Destabilizing | 0.884 | D | 0.403 | neutral | None | None | None | None | N |
T/S | 0.1275 | likely_benign | 0.1256 | benign | -0.711 | Destabilizing | 0.31 | N | 0.123 | neutral | N | 0.419373387 | None | None | N |
T/V | 0.2163 | likely_benign | 0.2147 | benign | -0.264 | Destabilizing | 0.969 | D | 0.343 | neutral | None | None | None | None | N |
T/W | 0.7157 | likely_pathogenic | 0.7078 | pathogenic | -0.742 | Destabilizing | 0.999 | D | 0.547 | neutral | None | None | None | None | N |
T/Y | 0.3586 | ambiguous | 0.3319 | benign | -0.502 | Destabilizing | 0.997 | D | 0.475 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.