Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29560 | 88903;88904;88905 | chr2:178554669;178554668;178554667 | chr2:179419396;179419395;179419394 |
N2AB | 27919 | 83980;83981;83982 | chr2:178554669;178554668;178554667 | chr2:179419396;179419395;179419394 |
N2A | 26992 | 81199;81200;81201 | chr2:178554669;178554668;178554667 | chr2:179419396;179419395;179419394 |
N2B | 20495 | 61708;61709;61710 | chr2:178554669;178554668;178554667 | chr2:179419396;179419395;179419394 |
Novex-1 | 20620 | 62083;62084;62085 | chr2:178554669;178554668;178554667 | chr2:179419396;179419395;179419394 |
Novex-2 | 20687 | 62284;62285;62286 | chr2:178554669;178554668;178554667 | chr2:179419396;179419395;179419394 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.999 | N | 0.559 | 0.419 | 0.381916209588 | gnomAD-4.0.0 | 1.36832E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79884E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3943 | ambiguous | 0.457 | ambiguous | -0.161 | Destabilizing | 0.999 | D | 0.559 | neutral | N | 0.471329105 | None | None | I |
D/C | 0.8148 | likely_pathogenic | 0.85 | pathogenic | 0.256 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
D/E | 0.3489 | ambiguous | 0.3925 | ambiguous | -0.264 | Destabilizing | 0.981 | D | 0.384 | neutral | N | 0.447002706 | None | None | I |
D/F | 0.7974 | likely_pathogenic | 0.8464 | pathogenic | -0.285 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
D/G | 0.4626 | ambiguous | 0.5237 | ambiguous | -0.335 | Destabilizing | 0.998 | D | 0.587 | neutral | N | 0.466569391 | None | None | I |
D/H | 0.5467 | ambiguous | 0.6138 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.50614701 | None | None | I |
D/I | 0.6628 | likely_pathogenic | 0.6938 | pathogenic | 0.241 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
D/K | 0.7329 | likely_pathogenic | 0.7708 | pathogenic | 0.448 | Stabilizing | 0.998 | D | 0.592 | neutral | None | None | None | None | I |
D/L | 0.6819 | likely_pathogenic | 0.7068 | pathogenic | 0.241 | Stabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
D/M | 0.8232 | likely_pathogenic | 0.8429 | pathogenic | 0.449 | Stabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
D/N | 0.1456 | likely_benign | 0.1584 | benign | 0.248 | Stabilizing | 0.999 | D | 0.632 | neutral | N | 0.4956793 | None | None | I |
D/P | 0.9646 | likely_pathogenic | 0.9667 | pathogenic | 0.129 | Stabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
D/Q | 0.6104 | likely_pathogenic | 0.6574 | pathogenic | 0.267 | Stabilizing | 0.967 | D | 0.42 | neutral | None | None | None | None | I |
D/R | 0.7265 | likely_pathogenic | 0.7744 | pathogenic | 0.492 | Stabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | I |
D/S | 0.2632 | likely_benign | 0.2999 | benign | 0.151 | Stabilizing | 0.997 | D | 0.565 | neutral | None | None | None | None | I |
D/T | 0.505 | ambiguous | 0.5178 | ambiguous | 0.284 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
D/V | 0.4419 | ambiguous | 0.4865 | ambiguous | 0.129 | Stabilizing | 0.999 | D | 0.665 | neutral | N | 0.469354095 | None | None | I |
D/W | 0.9628 | likely_pathogenic | 0.9742 | pathogenic | -0.225 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
D/Y | 0.4616 | ambiguous | 0.5353 | ambiguous | -0.061 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.488638684 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.