Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29567 | 88924;88925;88926 | chr2:178554648;178554647;178554646 | chr2:179419375;179419374;179419373 |
N2AB | 27926 | 84001;84002;84003 | chr2:178554648;178554647;178554646 | chr2:179419375;179419374;179419373 |
N2A | 26999 | 81220;81221;81222 | chr2:178554648;178554647;178554646 | chr2:179419375;179419374;179419373 |
N2B | 20502 | 61729;61730;61731 | chr2:178554648;178554647;178554646 | chr2:179419375;179419374;179419373 |
Novex-1 | 20627 | 62104;62105;62106 | chr2:178554648;178554647;178554646 | chr2:179419375;179419374;179419373 |
Novex-2 | 20694 | 62305;62306;62307 | chr2:178554648;178554647;178554646 | chr2:179419375;179419374;179419373 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 1.0 | N | 0.788 | 0.435 | 0.442160178816 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1958 | likely_benign | 0.1901 | benign | -0.838 | Destabilizing | 0.999 | D | 0.544 | neutral | N | 0.514658094 | None | None | N |
T/C | 0.6329 | likely_pathogenic | 0.6231 | pathogenic | -0.321 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/D | 0.5164 | ambiguous | 0.5061 | ambiguous | -0.732 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
T/E | 0.5373 | ambiguous | 0.4939 | ambiguous | -0.692 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
T/F | 0.5663 | likely_pathogenic | 0.56 | ambiguous | -0.612 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
T/G | 0.3764 | ambiguous | 0.4055 | ambiguous | -1.151 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
T/H | 0.498 | ambiguous | 0.5008 | ambiguous | -1.467 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
T/I | 0.4684 | ambiguous | 0.4113 | ambiguous | -0.071 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.469575267 | None | None | N |
T/K | 0.5105 | ambiguous | 0.4692 | ambiguous | -1.048 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
T/L | 0.2173 | likely_benign | 0.1972 | benign | -0.071 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/M | 0.1738 | likely_benign | 0.1636 | benign | 0.218 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/N | 0.2169 | likely_benign | 0.2135 | benign | -0.985 | Destabilizing | 1.0 | D | 0.788 | deleterious | N | 0.490477452 | None | None | N |
T/P | 0.6666 | likely_pathogenic | 0.6913 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.527788826 | None | None | N |
T/Q | 0.4291 | ambiguous | 0.4211 | ambiguous | -1.022 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
T/R | 0.4757 | ambiguous | 0.4512 | ambiguous | -0.905 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
T/S | 0.1054 | likely_benign | 0.1165 | benign | -1.155 | Destabilizing | 0.999 | D | 0.542 | neutral | N | 0.516750792 | None | None | N |
T/V | 0.3912 | ambiguous | 0.3466 | ambiguous | -0.295 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
T/W | 0.8572 | likely_pathogenic | 0.8595 | pathogenic | -0.669 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/Y | 0.6096 | likely_pathogenic | 0.6016 | pathogenic | -0.466 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.