Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29576 | 88951;88952;88953 | chr2:178554621;178554620;178554619 | chr2:179419348;179419347;179419346 |
N2AB | 27935 | 84028;84029;84030 | chr2:178554621;178554620;178554619 | chr2:179419348;179419347;179419346 |
N2A | 27008 | 81247;81248;81249 | chr2:178554621;178554620;178554619 | chr2:179419348;179419347;179419346 |
N2B | 20511 | 61756;61757;61758 | chr2:178554621;178554620;178554619 | chr2:179419348;179419347;179419346 |
Novex-1 | 20636 | 62131;62132;62133 | chr2:178554621;178554620;178554619 | chr2:179419348;179419347;179419346 |
Novex-2 | 20703 | 62332;62333;62334 | chr2:178554621;178554620;178554619 | chr2:179419348;179419347;179419346 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | rs1700623048 | None | 1.0 | N | 0.658 | 0.413 | 0.623315389809 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/R | rs1700623048 | None | 1.0 | N | 0.658 | 0.413 | 0.623315389809 | gnomAD-4.0.0 | 6.5735E-06 | None | None | None | None | N | None | 2.41429E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2296 | likely_benign | 0.2716 | benign | -0.775 | Destabilizing | 0.999 | D | 0.55 | neutral | N | 0.488542684 | None | None | N |
T/C | 0.8516 | likely_pathogenic | 0.8641 | pathogenic | -0.552 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
T/D | 0.875 | likely_pathogenic | 0.8859 | pathogenic | -0.104 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
T/E | 0.8286 | likely_pathogenic | 0.8347 | pathogenic | -0.119 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/F | 0.8608 | likely_pathogenic | 0.893 | pathogenic | -0.849 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
T/G | 0.6251 | likely_pathogenic | 0.6524 | pathogenic | -1.013 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/H | 0.7903 | likely_pathogenic | 0.8152 | pathogenic | -1.228 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
T/I | 0.666 | likely_pathogenic | 0.6892 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.507091159 | None | None | N |
T/K | 0.563 | ambiguous | 0.5623 | ambiguous | -0.72 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.475728102 | None | None | N |
T/L | 0.4044 | ambiguous | 0.4449 | ambiguous | -0.241 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
T/M | 0.2259 | likely_benign | 0.2394 | benign | -0.001 | Destabilizing | 1.0 | D | 0.622 | neutral | None | None | None | None | N |
T/N | 0.4187 | ambiguous | 0.4494 | ambiguous | -0.607 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/P | 0.5692 | likely_pathogenic | 0.6438 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.644 | neutral | N | 0.49487401 | None | None | N |
T/Q | 0.6572 | likely_pathogenic | 0.6775 | pathogenic | -0.814 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
T/R | 0.5577 | ambiguous | 0.5875 | pathogenic | -0.43 | Destabilizing | 1.0 | D | 0.658 | neutral | N | 0.466862561 | None | None | N |
T/S | 0.2684 | likely_benign | 0.3014 | benign | -0.914 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.490062836 | None | None | N |
T/V | 0.4677 | ambiguous | 0.4884 | ambiguous | -0.387 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
T/W | 0.9674 | likely_pathogenic | 0.975 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/Y | 0.8687 | likely_pathogenic | 0.8911 | pathogenic | -0.534 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.