Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29580 | 88963;88964;88965 | chr2:178554609;178554608;178554607 | chr2:179419336;179419335;179419334 |
N2AB | 27939 | 84040;84041;84042 | chr2:178554609;178554608;178554607 | chr2:179419336;179419335;179419334 |
N2A | 27012 | 81259;81260;81261 | chr2:178554609;178554608;178554607 | chr2:179419336;179419335;179419334 |
N2B | 20515 | 61768;61769;61770 | chr2:178554609;178554608;178554607 | chr2:179419336;179419335;179419334 |
Novex-1 | 20640 | 62143;62144;62145 | chr2:178554609;178554608;178554607 | chr2:179419336;179419335;179419334 |
Novex-2 | 20707 | 62344;62345;62346 | chr2:178554609;178554608;178554607 | chr2:179419336;179419335;179419334 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs371096025 | -0.103 | 0.509 | N | 0.267 | 0.167 | 0.5763749866 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 9.95E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
V/L | rs371096025 | -0.103 | 0.509 | N | 0.267 | 0.167 | 0.5763749866 | gnomAD-4.0.0 | 1.59102E-06 | None | None | None | None | I | None | 0 | 0 | None | 4.76644E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | None | -0.413 | 0.31 | N | 0.228 | 0.153 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3259 | likely_benign | 0.3447 | ambiguous | -0.683 | Destabilizing | 0.134 | N | 0.179 | neutral | N | 0.446829347 | None | None | I |
V/C | 0.8443 | likely_pathogenic | 0.8484 | pathogenic | -0.676 | Destabilizing | 0.999 | D | 0.327 | neutral | None | None | None | None | I |
V/D | 0.8225 | likely_pathogenic | 0.8433 | pathogenic | -0.472 | Destabilizing | 0.991 | D | 0.44 | neutral | None | None | None | None | I |
V/E | 0.7249 | likely_pathogenic | 0.7593 | pathogenic | -0.548 | Destabilizing | 0.988 | D | 0.349 | neutral | N | 0.430742387 | None | None | I |
V/F | 0.2979 | likely_benign | 0.3336 | benign | -0.697 | Destabilizing | 0.982 | D | 0.313 | neutral | None | None | None | None | I |
V/G | 0.4504 | ambiguous | 0.4699 | ambiguous | -0.861 | Destabilizing | 0.92 | D | 0.386 | neutral | N | 0.43788179 | None | None | I |
V/H | 0.8449 | likely_pathogenic | 0.863 | pathogenic | -0.304 | Destabilizing | 0.999 | D | 0.461 | neutral | None | None | None | None | I |
V/I | 0.0993 | likely_benign | 0.1027 | benign | -0.342 | Destabilizing | 0.759 | D | 0.375 | neutral | None | None | None | None | I |
V/K | 0.8005 | likely_pathogenic | 0.8258 | pathogenic | -0.638 | Destabilizing | 0.969 | D | 0.36 | neutral | None | None | None | None | I |
V/L | 0.2881 | likely_benign | 0.3242 | benign | -0.342 | Destabilizing | 0.509 | D | 0.267 | neutral | N | 0.409831184 | None | None | I |
V/M | 0.2223 | likely_benign | 0.2568 | benign | -0.476 | Destabilizing | 0.31 | N | 0.228 | neutral | N | 0.476229535 | None | None | I |
V/N | 0.5333 | ambiguous | 0.5593 | ambiguous | -0.411 | Destabilizing | 0.997 | D | 0.437 | neutral | None | None | None | None | I |
V/P | 0.8644 | likely_pathogenic | 0.8782 | pathogenic | -0.42 | Destabilizing | 0.991 | D | 0.402 | neutral | None | None | None | None | I |
V/Q | 0.6257 | likely_pathogenic | 0.6581 | pathogenic | -0.62 | Destabilizing | 0.991 | D | 0.412 | neutral | None | None | None | None | I |
V/R | 0.7365 | likely_pathogenic | 0.7576 | pathogenic | -0.1 | Destabilizing | 0.991 | D | 0.442 | neutral | None | None | None | None | I |
V/S | 0.3882 | ambiguous | 0.4038 | ambiguous | -0.793 | Destabilizing | 0.884 | D | 0.326 | neutral | None | None | None | None | I |
V/T | 0.373 | ambiguous | 0.3972 | ambiguous | -0.766 | Destabilizing | 0.939 | D | 0.297 | neutral | None | None | None | None | I |
V/W | 0.9435 | likely_pathogenic | 0.9526 | pathogenic | -0.794 | Destabilizing | 0.999 | D | 0.499 | neutral | None | None | None | None | I |
V/Y | 0.8025 | likely_pathogenic | 0.8147 | pathogenic | -0.509 | Destabilizing | 0.997 | D | 0.3 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.