Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29603 | 89032;89033;89034 | chr2:178554540;178554539;178554538 | chr2:179419267;179419266;179419265 |
N2AB | 27962 | 84109;84110;84111 | chr2:178554540;178554539;178554538 | chr2:179419267;179419266;179419265 |
N2A | 27035 | 81328;81329;81330 | chr2:178554540;178554539;178554538 | chr2:179419267;179419266;179419265 |
N2B | 20538 | 61837;61838;61839 | chr2:178554540;178554539;178554538 | chr2:179419267;179419266;179419265 |
Novex-1 | 20663 | 62212;62213;62214 | chr2:178554540;178554539;178554538 | chr2:179419267;179419266;179419265 |
Novex-2 | 20730 | 62413;62414;62415 | chr2:178554540;178554539;178554538 | chr2:179419267;179419266;179419265 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs777572153 | -0.501 | 0.999 | N | 0.606 | 0.387 | 0.357724736475 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.8E-05 | None | 0 | 0 | 0 |
E/K | rs777572153 | -0.501 | 0.999 | N | 0.606 | 0.387 | 0.357724736475 | gnomAD-4.0.0 | 1.27303E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.14623E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5048 | ambiguous | 0.5006 | ambiguous | -1.128 | Destabilizing | 0.999 | D | 0.704 | prob.neutral | D | 0.523311405 | None | None | N |
E/C | 0.9672 | likely_pathogenic | 0.9638 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
E/D | 0.5394 | ambiguous | 0.6 | pathogenic | -1.002 | Destabilizing | 0.999 | D | 0.49 | neutral | N | 0.468610534 | None | None | N |
E/F | 0.982 | likely_pathogenic | 0.9842 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/G | 0.6959 | likely_pathogenic | 0.6923 | pathogenic | -1.497 | Destabilizing | 1.0 | D | 0.757 | deleterious | N | 0.48255096 | None | None | N |
E/H | 0.8751 | likely_pathogenic | 0.8753 | pathogenic | -0.789 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/I | 0.7988 | likely_pathogenic | 0.8074 | pathogenic | -0.109 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/K | 0.5084 | ambiguous | 0.5111 | ambiguous | -0.494 | Destabilizing | 0.999 | D | 0.606 | neutral | N | 0.513035697 | None | None | N |
E/L | 0.882 | likely_pathogenic | 0.8895 | pathogenic | -0.109 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
E/M | 0.8635 | likely_pathogenic | 0.8677 | pathogenic | 0.44 | Stabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
E/N | 0.7091 | likely_pathogenic | 0.7262 | pathogenic | -1.006 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/P | 0.9612 | likely_pathogenic | 0.9609 | pathogenic | -0.429 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
E/Q | 0.308 | likely_benign | 0.2894 | benign | -0.884 | Destabilizing | 1.0 | D | 0.633 | neutral | D | 0.522617972 | None | None | N |
E/R | 0.6558 | likely_pathogenic | 0.6575 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/S | 0.5789 | likely_pathogenic | 0.5776 | pathogenic | -1.382 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
E/T | 0.5845 | likely_pathogenic | 0.5718 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/V | 0.646 | likely_pathogenic | 0.65 | pathogenic | -0.429 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.472600233 | None | None | N |
E/W | 0.9947 | likely_pathogenic | 0.9956 | pathogenic | -0.232 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/Y | 0.9608 | likely_pathogenic | 0.9656 | pathogenic | -0.262 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.