Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29622 | 89089;89090;89091 | chr2:178554483;178554482;178554481 | chr2:179419210;179419209;179419208 |
N2AB | 27981 | 84166;84167;84168 | chr2:178554483;178554482;178554481 | chr2:179419210;179419209;179419208 |
N2A | 27054 | 81385;81386;81387 | chr2:178554483;178554482;178554481 | chr2:179419210;179419209;179419208 |
N2B | 20557 | 61894;61895;61896 | chr2:178554483;178554482;178554481 | chr2:179419210;179419209;179419208 |
Novex-1 | 20682 | 62269;62270;62271 | chr2:178554483;178554482;178554481 | chr2:179419210;179419209;179419208 |
Novex-2 | 20749 | 62470;62471;62472 | chr2:178554483;178554482;178554481 | chr2:179419210;179419209;179419208 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | rs1274325104 | -0.563 | 0.999 | D | 0.873 | 0.466 | 0.695963169682 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 5.81E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/Y | rs1274325104 | -0.563 | 0.999 | D | 0.873 | 0.466 | 0.695963169682 | gnomAD-4.0.0 | 3.18379E-06 | None | None | None | None | N | None | 0 | 4.57457E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3568 | ambiguous | 0.4092 | ambiguous | -0.606 | Destabilizing | 0.994 | D | 0.664 | prob.neutral | N | 0.49573828 | None | None | N |
S/C | 0.4749 | ambiguous | 0.5079 | ambiguous | -0.226 | Destabilizing | 1.0 | D | 0.806 | deleterious | N | 0.514629457 | None | None | N |
S/D | 0.9748 | likely_pathogenic | 0.9774 | pathogenic | 0.096 | Stabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
S/E | 0.9913 | likely_pathogenic | 0.9928 | pathogenic | 0.209 | Stabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | N |
S/F | 0.9808 | likely_pathogenic | 0.9869 | pathogenic | -0.585 | Destabilizing | 0.999 | D | 0.874 | deleterious | D | 0.540874013 | None | None | N |
S/G | 0.3409 | ambiguous | 0.3819 | ambiguous | -0.953 | Destabilizing | 0.998 | D | 0.735 | deleterious | None | None | None | None | N |
S/H | 0.9831 | likely_pathogenic | 0.9843 | pathogenic | -1.206 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
S/I | 0.9433 | likely_pathogenic | 0.9599 | pathogenic | 0.239 | Stabilizing | 0.999 | D | 0.882 | deleterious | None | None | None | None | N |
S/K | 0.9979 | likely_pathogenic | 0.9983 | pathogenic | 0.054 | Stabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
S/L | 0.8224 | likely_pathogenic | 0.8635 | pathogenic | 0.239 | Stabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
S/M | 0.8126 | likely_pathogenic | 0.8544 | pathogenic | 0.164 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
S/N | 0.9052 | likely_pathogenic | 0.9116 | pathogenic | -0.258 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
S/P | 0.992 | likely_pathogenic | 0.9943 | pathogenic | -0.007 | Destabilizing | 0.999 | D | 0.879 | deleterious | N | 0.511248869 | None | None | N |
S/Q | 0.9888 | likely_pathogenic | 0.9906 | pathogenic | -0.153 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
S/R | 0.9973 | likely_pathogenic | 0.998 | pathogenic | -0.179 | Destabilizing | 0.999 | D | 0.878 | deleterious | None | None | None | None | N |
S/T | 0.1764 | likely_benign | 0.21 | benign | -0.198 | Destabilizing | 0.997 | D | 0.739 | deleterious | N | 0.511619905 | None | None | N |
S/V | 0.8746 | likely_pathogenic | 0.9074 | pathogenic | -0.007 | Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | N |
S/W | 0.9853 | likely_pathogenic | 0.9893 | pathogenic | -0.653 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
S/Y | 0.9753 | likely_pathogenic | 0.981 | pathogenic | -0.261 | Destabilizing | 0.999 | D | 0.873 | deleterious | D | 0.551976829 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.