Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29644 | 89155;89156;89157 | chr2:178554181;178554180;178554179 | chr2:179418908;179418907;179418906 |
N2AB | 28003 | 84232;84233;84234 | chr2:178554181;178554180;178554179 | chr2:179418908;179418907;179418906 |
N2A | 27076 | 81451;81452;81453 | chr2:178554181;178554180;178554179 | chr2:179418908;179418907;179418906 |
N2B | 20579 | 61960;61961;61962 | chr2:178554181;178554180;178554179 | chr2:179418908;179418907;179418906 |
Novex-1 | 20704 | 62335;62336;62337 | chr2:178554181;178554180;178554179 | chr2:179418908;179418907;179418906 |
Novex-2 | 20771 | 62536;62537;62538 | chr2:178554181;178554180;178554179 | chr2:179418908;179418907;179418906 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.27 | N | 0.243 | 0.059 | 0.201204373187 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3392 | likely_benign | 0.3737 | ambiguous | 0.029 | Stabilizing | 0.495 | N | 0.341 | neutral | None | None | None | None | N |
K/C | 0.6259 | likely_pathogenic | 0.6292 | pathogenic | -0.189 | Destabilizing | 0.995 | D | 0.371 | neutral | None | None | None | None | N |
K/D | 0.5857 | likely_pathogenic | 0.6381 | pathogenic | 0.191 | Stabilizing | 0.704 | D | 0.324 | neutral | None | None | None | None | N |
K/E | 0.2959 | likely_benign | 0.3587 | ambiguous | 0.205 | Stabilizing | 0.27 | N | 0.315 | neutral | N | 0.4034225 | None | None | N |
K/F | 0.8265 | likely_pathogenic | 0.8534 | pathogenic | -0.154 | Destabilizing | 0.893 | D | 0.41 | neutral | None | None | None | None | N |
K/G | 0.4183 | ambiguous | 0.4668 | ambiguous | -0.181 | Destabilizing | 0.704 | D | 0.363 | neutral | None | None | None | None | N |
K/H | 0.2934 | likely_benign | 0.3162 | benign | -0.447 | Destabilizing | 0.944 | D | 0.363 | neutral | None | None | None | None | N |
K/I | 0.5726 | likely_pathogenic | 0.6062 | pathogenic | 0.503 | Stabilizing | 0.543 | D | 0.415 | neutral | None | None | None | None | N |
K/L | 0.4322 | ambiguous | 0.4433 | ambiguous | 0.503 | Stabilizing | 0.069 | N | 0.286 | neutral | None | None | None | None | N |
K/M | 0.2449 | likely_benign | 0.2564 | benign | 0.28 | Stabilizing | 0.029 | N | 0.083 | neutral | N | 0.460318719 | None | None | N |
K/N | 0.4175 | ambiguous | 0.4532 | ambiguous | 0.246 | Stabilizing | 0.642 | D | 0.305 | neutral | N | 0.382932584 | None | None | N |
K/P | 0.9359 | likely_pathogenic | 0.9521 | pathogenic | 0.373 | Stabilizing | 0.828 | D | 0.377 | neutral | None | None | None | None | N |
K/Q | 0.1556 | likely_benign | 0.1822 | benign | 0.087 | Stabilizing | 0.023 | N | 0.083 | neutral | N | 0.447157421 | None | None | N |
K/R | 0.0885 | likely_benign | 0.0952 | benign | -0.009 | Destabilizing | 0.27 | N | 0.243 | neutral | N | 0.464761747 | None | None | N |
K/S | 0.4056 | ambiguous | 0.4508 | ambiguous | -0.269 | Destabilizing | 0.495 | N | 0.255 | neutral | None | None | None | None | N |
K/T | 0.2408 | likely_benign | 0.285 | benign | -0.101 | Destabilizing | 0.642 | D | 0.321 | neutral | N | 0.454526111 | None | None | N |
K/V | 0.4006 | ambiguous | 0.4178 | ambiguous | 0.373 | Stabilizing | 0.329 | N | 0.343 | neutral | None | None | None | None | N |
K/W | 0.7986 | likely_pathogenic | 0.8375 | pathogenic | -0.164 | Destabilizing | 0.995 | D | 0.375 | neutral | None | None | None | None | N |
K/Y | 0.6279 | likely_pathogenic | 0.6684 | pathogenic | 0.196 | Stabilizing | 0.944 | D | 0.389 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.