Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29670 | 89233;89234;89235 | chr2:178554103;178554102;178554101 | chr2:179418830;179418829;179418828 |
N2AB | 28029 | 84310;84311;84312 | chr2:178554103;178554102;178554101 | chr2:179418830;179418829;179418828 |
N2A | 27102 | 81529;81530;81531 | chr2:178554103;178554102;178554101 | chr2:179418830;179418829;179418828 |
N2B | 20605 | 62038;62039;62040 | chr2:178554103;178554102;178554101 | chr2:179418830;179418829;179418828 |
Novex-1 | 20730 | 62413;62414;62415 | chr2:178554103;178554102;178554101 | chr2:179418830;179418829;179418828 |
Novex-2 | 20797 | 62614;62615;62616 | chr2:178554103;178554102;178554101 | chr2:179418830;179418829;179418828 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs931707459 | -2.45 | 1.0 | N | 0.897 | 0.726 | 0.833606934997 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
L/P | rs931707459 | -2.45 | 1.0 | N | 0.897 | 0.726 | 0.833606934997 | gnomAD-4.0.0 | 2.05256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79889E-06 | 1.15937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9042 | likely_pathogenic | 0.9205 | pathogenic | -3.335 | Highly Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
L/C | 0.889 | likely_pathogenic | 0.9045 | pathogenic | -2.304 | Highly Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.938 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/E | 0.9973 | likely_pathogenic | 0.998 | pathogenic | -3.632 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/F | 0.8626 | likely_pathogenic | 0.883 | pathogenic | -2.086 | Highly Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.526916679 | None | None | N |
L/G | 0.9932 | likely_pathogenic | 0.9944 | pathogenic | -3.881 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
L/H | 0.9943 | likely_pathogenic | 0.9957 | pathogenic | -3.346 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.527170169 | None | None | N |
L/I | 0.1462 | likely_benign | 0.1617 | benign | -1.654 | Destabilizing | 0.999 | D | 0.561 | neutral | N | 0.425757855 | None | None | N |
L/K | 0.9961 | likely_pathogenic | 0.9967 | pathogenic | -2.871 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
L/M | 0.4109 | ambiguous | 0.4381 | ambiguous | -1.706 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
L/N | 0.9987 | likely_pathogenic | 0.9989 | pathogenic | -3.635 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
L/P | 0.9927 | likely_pathogenic | 0.9949 | pathogenic | -2.213 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | N | 0.504457558 | None | None | N |
L/Q | 0.9883 | likely_pathogenic | 0.9909 | pathogenic | -3.291 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/R | 0.9896 | likely_pathogenic | 0.9922 | pathogenic | -2.781 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | D | 0.527170169 | None | None | N |
L/S | 0.9914 | likely_pathogenic | 0.9937 | pathogenic | -4.069 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/T | 0.9155 | likely_pathogenic | 0.938 | pathogenic | -3.618 | Highly Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
L/V | 0.1331 | likely_benign | 0.1465 | benign | -2.213 | Highly Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.400875266 | None | None | N |
L/W | 0.9853 | likely_pathogenic | 0.9901 | pathogenic | -2.317 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
L/Y | 0.9913 | likely_pathogenic | 0.993 | pathogenic | -2.304 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.