Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29675 | 89248;89249;89250 | chr2:178554088;178554087;178554086 | chr2:179418815;179418814;179418813 |
N2AB | 28034 | 84325;84326;84327 | chr2:178554088;178554087;178554086 | chr2:179418815;179418814;179418813 |
N2A | 27107 | 81544;81545;81546 | chr2:178554088;178554087;178554086 | chr2:179418815;179418814;179418813 |
N2B | 20610 | 62053;62054;62055 | chr2:178554088;178554087;178554086 | chr2:179418815;179418814;179418813 |
Novex-1 | 20735 | 62428;62429;62430 | chr2:178554088;178554087;178554086 | chr2:179418815;179418814;179418813 |
Novex-2 | 20802 | 62629;62630;62631 | chr2:178554088;178554087;178554086 | chr2:179418815;179418814;179418813 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.999 | N | 0.598 | 0.334 | 0.438806408302 | gnomAD-4.0.0 | 1.59106E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85791E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6277 | likely_pathogenic | 0.7505 | pathogenic | -0.726 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
K/C | 0.8215 | likely_pathogenic | 0.871 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/D | 0.9035 | likely_pathogenic | 0.9509 | pathogenic | 0.064 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
K/E | 0.4162 | ambiguous | 0.5718 | pathogenic | 0.162 | Stabilizing | 0.999 | D | 0.674 | neutral | N | 0.517537439 | None | None | N |
K/F | 0.9336 | likely_pathogenic | 0.9616 | pathogenic | -0.514 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
K/G | 0.66 | likely_pathogenic | 0.7719 | pathogenic | -1.063 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
K/H | 0.5591 | ambiguous | 0.6507 | pathogenic | -1.339 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
K/I | 0.6522 | likely_pathogenic | 0.7528 | pathogenic | 0.137 | Stabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/L | 0.6235 | likely_pathogenic | 0.72 | pathogenic | 0.137 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
K/M | 0.4469 | ambiguous | 0.559 | ambiguous | 0.051 | Stabilizing | 1.0 | D | 0.664 | neutral | N | 0.477017552 | None | None | N |
K/N | 0.8218 | likely_pathogenic | 0.9026 | pathogenic | -0.35 | Destabilizing | 1.0 | D | 0.756 | deleterious | N | 0.477106457 | None | None | N |
K/P | 0.8988 | likely_pathogenic | 0.9367 | pathogenic | -0.121 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/Q | 0.2002 | likely_benign | 0.2639 | benign | -0.447 | Destabilizing | 1.0 | D | 0.752 | deleterious | N | 0.476737609 | None | None | N |
K/R | 0.0788 | likely_benign | 0.0839 | benign | -0.49 | Destabilizing | 0.999 | D | 0.598 | neutral | N | 0.51775087 | None | None | N |
K/S | 0.7122 | likely_pathogenic | 0.8204 | pathogenic | -1.077 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/T | 0.464 | ambiguous | 0.6095 | pathogenic | -0.769 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | N | 0.472727869 | None | None | N |
K/V | 0.5859 | likely_pathogenic | 0.6897 | pathogenic | -0.121 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
K/W | 0.8897 | likely_pathogenic | 0.9248 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/Y | 0.8598 | likely_pathogenic | 0.9028 | pathogenic | -0.067 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.