Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29677 | 89254;89255;89256 | chr2:178554082;178554081;178554080 | chr2:179418809;179418808;179418807 |
N2AB | 28036 | 84331;84332;84333 | chr2:178554082;178554081;178554080 | chr2:179418809;179418808;179418807 |
N2A | 27109 | 81550;81551;81552 | chr2:178554082;178554081;178554080 | chr2:179418809;179418808;179418807 |
N2B | 20612 | 62059;62060;62061 | chr2:178554082;178554081;178554080 | chr2:179418809;179418808;179418807 |
Novex-1 | 20737 | 62434;62435;62436 | chr2:178554082;178554081;178554080 | chr2:179418809;179418808;179418807 |
Novex-2 | 20804 | 62635;62636;62637 | chr2:178554082;178554081;178554080 | chr2:179418809;179418808;179418807 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 1.0 | N | 0.614 | 0.416 | 0.273070737957 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85799E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1177 | likely_benign | 0.1279 | benign | -0.483 | Destabilizing | 0.998 | D | 0.373 | neutral | None | None | None | None | N |
S/C | 0.1348 | likely_benign | 0.1454 | benign | -0.338 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.509654436 | None | None | N |
S/D | 0.7757 | likely_pathogenic | 0.8297 | pathogenic | 0.64 | Stabilizing | 0.999 | D | 0.489 | neutral | None | None | None | None | N |
S/E | 0.8617 | likely_pathogenic | 0.8908 | pathogenic | 0.565 | Stabilizing | 0.999 | D | 0.468 | neutral | None | None | None | None | N |
S/F | 0.3742 | ambiguous | 0.4432 | ambiguous | -0.968 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
S/G | 0.1063 | likely_benign | 0.1106 | benign | -0.616 | Destabilizing | 0.999 | D | 0.361 | neutral | N | 0.468666057 | None | None | N |
S/H | 0.5288 | ambiguous | 0.558 | ambiguous | -1.001 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
S/I | 0.3342 | likely_benign | 0.4072 | ambiguous | -0.261 | Destabilizing | 1.0 | D | 0.62 | neutral | N | 0.515984312 | None | None | N |
S/K | 0.9096 | likely_pathogenic | 0.9275 | pathogenic | -0.343 | Destabilizing | 0.999 | D | 0.477 | neutral | None | None | None | None | N |
S/L | 0.154 | likely_benign | 0.1819 | benign | -0.261 | Destabilizing | 1.0 | D | 0.549 | neutral | None | None | None | None | N |
S/M | 0.252 | likely_benign | 0.2835 | benign | -0.118 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
S/N | 0.2248 | likely_benign | 0.2615 | benign | -0.098 | Destabilizing | 0.999 | D | 0.454 | neutral | N | 0.518036085 | None | None | N |
S/P | 0.8749 | likely_pathogenic | 0.9298 | pathogenic | -0.305 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
S/Q | 0.7028 | likely_pathogenic | 0.722 | pathogenic | -0.293 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
S/R | 0.8592 | likely_pathogenic | 0.8874 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.614 | neutral | N | 0.477431944 | None | None | N |
S/T | 0.1098 | likely_benign | 0.1213 | benign | -0.274 | Destabilizing | 0.999 | D | 0.339 | neutral | N | 0.504549499 | None | None | N |
S/V | 0.2991 | likely_benign | 0.3543 | ambiguous | -0.305 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
S/W | 0.5779 | likely_pathogenic | 0.6437 | pathogenic | -0.934 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
S/Y | 0.2993 | likely_benign | 0.3498 | ambiguous | -0.664 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.