Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29679 | 89260;89261;89262 | chr2:178554076;178554075;178554074 | chr2:179418803;179418802;179418801 |
N2AB | 28038 | 84337;84338;84339 | chr2:178554076;178554075;178554074 | chr2:179418803;179418802;179418801 |
N2A | 27111 | 81556;81557;81558 | chr2:178554076;178554075;178554074 | chr2:179418803;179418802;179418801 |
N2B | 20614 | 62065;62066;62067 | chr2:178554076;178554075;178554074 | chr2:179418803;179418802;179418801 |
Novex-1 | 20739 | 62440;62441;62442 | chr2:178554076;178554075;178554074 | chr2:179418803;179418802;179418801 |
Novex-2 | 20806 | 62641;62642;62643 | chr2:178554076;178554075;178554074 | chr2:179418803;179418802;179418801 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs774651157 | 0.011 | None | N | 0.192 | 0.172 | 0.299427821978 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
G/R | rs774651157 | 0.011 | None | N | 0.192 | 0.172 | 0.299427821978 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
G/R | rs774651157 | 0.011 | None | N | 0.192 | 0.172 | 0.299427821978 | gnomAD-4.0.0 | 2.66471E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.55994E-05 | 0 | 1.60102E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0813 | likely_benign | 0.091 | benign | -0.288 | Destabilizing | None | N | 0.177 | neutral | N | 0.447754854 | None | None | I |
G/C | 0.1508 | likely_benign | 0.1602 | benign | -0.57 | Destabilizing | 0.676 | D | 0.462 | neutral | None | None | None | None | I |
G/D | 0.3895 | ambiguous | 0.4968 | ambiguous | 0.087 | Stabilizing | 0.072 | N | 0.407 | neutral | None | None | None | None | I |
G/E | 0.308 | likely_benign | 0.4084 | ambiguous | 0.015 | Stabilizing | 0.012 | N | 0.429 | neutral | N | 0.405713443 | None | None | I |
G/F | 0.4606 | ambiguous | 0.5483 | ambiguous | -0.648 | Destabilizing | 0.356 | N | 0.466 | neutral | None | None | None | None | I |
G/H | 0.337 | likely_benign | 0.3872 | ambiguous | -0.512 | Destabilizing | 0.356 | N | 0.446 | neutral | None | None | None | None | I |
G/I | 0.1736 | likely_benign | 0.2092 | benign | -0.086 | Destabilizing | 0.214 | N | 0.46 | neutral | None | None | None | None | I |
G/K | 0.447 | ambiguous | 0.5374 | ambiguous | -0.536 | Destabilizing | 0.016 | N | 0.437 | neutral | None | None | None | None | I |
G/L | 0.2508 | likely_benign | 0.3075 | benign | -0.086 | Destabilizing | 0.038 | N | 0.429 | neutral | None | None | None | None | I |
G/M | 0.3157 | likely_benign | 0.3537 | ambiguous | -0.336 | Destabilizing | 0.356 | N | 0.471 | neutral | None | None | None | None | I |
G/N | 0.2447 | likely_benign | 0.2865 | benign | -0.256 | Destabilizing | 0.072 | N | 0.457 | neutral | None | None | None | None | I |
G/P | 0.8112 | likely_pathogenic | 0.8557 | pathogenic | -0.115 | Destabilizing | 0.072 | N | 0.417 | neutral | None | None | None | None | I |
G/Q | 0.3038 | likely_benign | 0.3427 | ambiguous | -0.378 | Destabilizing | 0.003 | N | 0.219 | neutral | None | None | None | None | I |
G/R | 0.3177 | likely_benign | 0.3886 | ambiguous | -0.296 | Destabilizing | None | N | 0.192 | neutral | N | 0.340280672 | None | None | I |
G/S | 0.0875 | likely_benign | 0.0954 | benign | -0.573 | Destabilizing | 0.001 | N | 0.195 | neutral | None | None | None | None | I |
G/T | 0.1094 | likely_benign | 0.1201 | benign | -0.544 | Destabilizing | 0.038 | N | 0.422 | neutral | None | None | None | None | I |
G/V | 0.1117 | likely_benign | 0.1357 | benign | -0.115 | Destabilizing | 0.029 | N | 0.421 | neutral | N | 0.447274851 | None | None | I |
G/W | 0.4053 | ambiguous | 0.4631 | ambiguous | -0.924 | Destabilizing | 0.864 | D | 0.454 | neutral | None | None | None | None | I |
G/Y | 0.3436 | ambiguous | 0.415 | ambiguous | -0.489 | Destabilizing | 0.356 | N | 0.469 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.