Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29692 | 89299;89300;89301 | chr2:178554037;178554036;178554035 | chr2:179418764;179418763;179418762 |
N2AB | 28051 | 84376;84377;84378 | chr2:178554037;178554036;178554035 | chr2:179418764;179418763;179418762 |
N2A | 27124 | 81595;81596;81597 | chr2:178554037;178554036;178554035 | chr2:179418764;179418763;179418762 |
N2B | 20627 | 62104;62105;62106 | chr2:178554037;178554036;178554035 | chr2:179418764;179418763;179418762 |
Novex-1 | 20752 | 62479;62480;62481 | chr2:178554037;178554036;178554035 | chr2:179418764;179418763;179418762 |
Novex-2 | 20819 | 62680;62681;62682 | chr2:178554037;178554036;178554035 | chr2:179418764;179418763;179418762 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs745523889 | -0.685 | 0.997 | N | 0.489 | 0.243 | 0.259272394797 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.89E-06 | 0 |
R/K | rs745523889 | -0.685 | 0.997 | N | 0.489 | 0.243 | 0.259272394797 | gnomAD-4.0.0 | 6.1581E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69835E-06 | 6.95604E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8959 | likely_pathogenic | 0.9127 | pathogenic | -0.308 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
R/C | 0.3964 | ambiguous | 0.4543 | ambiguous | -0.416 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
R/D | 0.9718 | likely_pathogenic | 0.9778 | pathogenic | 0.068 | Stabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
R/E | 0.8355 | likely_pathogenic | 0.8494 | pathogenic | 0.182 | Stabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
R/F | 0.8869 | likely_pathogenic | 0.9065 | pathogenic | -0.252 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
R/G | 0.8157 | likely_pathogenic | 0.8596 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | N | 0.485638379 | None | None | N |
R/H | 0.2768 | likely_benign | 0.3122 | benign | -0.976 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
R/I | 0.7559 | likely_pathogenic | 0.7616 | pathogenic | 0.408 | Stabilizing | 1.0 | D | 0.805 | deleterious | N | 0.51532664 | None | None | N |
R/K | 0.3246 | likely_benign | 0.3349 | benign | -0.315 | Destabilizing | 0.997 | D | 0.489 | neutral | N | 0.5023387 | None | None | N |
R/L | 0.7418 | likely_pathogenic | 0.7648 | pathogenic | 0.408 | Stabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
R/M | 0.794 | likely_pathogenic | 0.8056 | pathogenic | -0.11 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
R/N | 0.9356 | likely_pathogenic | 0.945 | pathogenic | -0.029 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
R/P | 0.9877 | likely_pathogenic | 0.9905 | pathogenic | 0.191 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
R/Q | 0.2892 | likely_benign | 0.3073 | benign | -0.107 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
R/S | 0.8939 | likely_pathogenic | 0.9125 | pathogenic | -0.586 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.427491438 | None | None | N |
R/T | 0.7404 | likely_pathogenic | 0.7519 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.456352908 | None | None | N |
R/V | 0.798 | likely_pathogenic | 0.8059 | pathogenic | 0.191 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
R/W | 0.4298 | ambiguous | 0.4965 | ambiguous | -0.107 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
R/Y | 0.7334 | likely_pathogenic | 0.7729 | pathogenic | 0.241 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.