Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29709 | 89350;89351;89352 | chr2:178553986;178553985;178553984 | chr2:179418713;179418712;179418711 |
N2AB | 28068 | 84427;84428;84429 | chr2:178553986;178553985;178553984 | chr2:179418713;179418712;179418711 |
N2A | 27141 | 81646;81647;81648 | chr2:178553986;178553985;178553984 | chr2:179418713;179418712;179418711 |
N2B | 20644 | 62155;62156;62157 | chr2:178553986;178553985;178553984 | chr2:179418713;179418712;179418711 |
Novex-1 | 20769 | 62530;62531;62532 | chr2:178553986;178553985;178553984 | chr2:179418713;179418712;179418711 |
Novex-2 | 20836 | 62731;62732;62733 | chr2:178553986;178553985;178553984 | chr2:179418713;179418712;179418711 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.963 | N | 0.743 | 0.306 | 0.715593384032 | gnomAD-4.0.0 | 1.59369E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85858E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.2977 | likely_benign | 0.2845 | benign | -1.412 | Destabilizing | 0.25 | N | 0.591 | neutral | None | None | None | None | N |
C/D | 0.9527 | likely_pathogenic | 0.9553 | pathogenic | -1.608 | Destabilizing | 0.85 | D | 0.758 | deleterious | None | None | None | None | N |
C/E | 0.9525 | likely_pathogenic | 0.9492 | pathogenic | -1.363 | Destabilizing | 0.85 | D | 0.755 | deleterious | None | None | None | None | N |
C/F | 0.3977 | ambiguous | 0.3761 | ambiguous | -0.848 | Destabilizing | 0.81 | D | 0.746 | deleterious | N | 0.423203126 | None | None | N |
C/G | 0.2528 | likely_benign | 0.253 | benign | -1.715 | Destabilizing | 0.379 | N | 0.735 | prob.delet. | N | 0.50866724 | None | None | N |
C/H | 0.7278 | likely_pathogenic | 0.7133 | pathogenic | -1.839 | Destabilizing | 0.977 | D | 0.741 | deleterious | None | None | None | None | N |
C/I | 0.7119 | likely_pathogenic | 0.7161 | pathogenic | -0.581 | Destabilizing | 0.447 | N | 0.753 | deleterious | None | None | None | None | N |
C/K | 0.92 | likely_pathogenic | 0.906 | pathogenic | -0.993 | Destabilizing | 0.739 | D | 0.741 | deleterious | None | None | None | None | N |
C/L | 0.6121 | likely_pathogenic | 0.5924 | pathogenic | -0.581 | Destabilizing | 0.005 | N | 0.509 | neutral | None | None | None | None | N |
C/M | 0.655 | likely_pathogenic | 0.6617 | pathogenic | -0.99 | Destabilizing | 0.85 | D | 0.758 | deleterious | None | None | None | None | N |
C/N | 0.7221 | likely_pathogenic | 0.7319 | pathogenic | -1.571 | Destabilizing | 0.739 | D | 0.761 | deleterious | None | None | None | None | N |
C/P | 0.9976 | likely_pathogenic | 0.9976 | pathogenic | -0.841 | Destabilizing | 0.92 | D | 0.767 | deleterious | None | None | None | None | N |
C/Q | 0.7606 | likely_pathogenic | 0.7564 | pathogenic | -1.069 | Destabilizing | 0.85 | D | 0.767 | deleterious | None | None | None | None | N |
C/R | 0.6855 | likely_pathogenic | 0.6589 | pathogenic | -1.499 | Destabilizing | 0.81 | D | 0.766 | deleterious | N | 0.404865295 | None | None | N |
C/S | 0.2377 | likely_benign | 0.2438 | benign | -1.793 | Destabilizing | 0.007 | N | 0.461 | neutral | N | 0.375179893 | None | None | N |
C/T | 0.5116 | ambiguous | 0.5269 | ambiguous | -1.398 | Destabilizing | 0.447 | N | 0.741 | deleterious | None | None | None | None | N |
C/V | 0.5692 | likely_pathogenic | 0.5672 | pathogenic | -0.841 | Destabilizing | 0.447 | N | 0.738 | prob.delet. | None | None | None | None | N |
C/W | 0.7931 | likely_pathogenic | 0.7798 | pathogenic | -1.298 | Destabilizing | 0.99 | D | 0.714 | prob.delet. | N | 0.47357083 | None | None | N |
C/Y | 0.5478 | ambiguous | 0.4969 | ambiguous | -1.039 | Destabilizing | 0.963 | D | 0.743 | deleterious | N | 0.39961419 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.