Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29759 | 89500;89501;89502 | chr2:178553730;178553729;178553728 | chr2:179418457;179418456;179418455 |
N2AB | 28118 | 84577;84578;84579 | chr2:178553730;178553729;178553728 | chr2:179418457;179418456;179418455 |
N2A | 27191 | 81796;81797;81798 | chr2:178553730;178553729;178553728 | chr2:179418457;179418456;179418455 |
N2B | 20694 | 62305;62306;62307 | chr2:178553730;178553729;178553728 | chr2:179418457;179418456;179418455 |
Novex-1 | 20819 | 62680;62681;62682 | chr2:178553730;178553729;178553728 | chr2:179418457;179418456;179418455 |
Novex-2 | 20886 | 62881;62882;62883 | chr2:178553730;178553729;178553728 | chr2:179418457;179418456;179418455 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.022 | N | 0.141 | 0.088 | 0.266843984389 | gnomAD-4.0.0 | 1.59199E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8593E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1928 | likely_benign | 0.195 | benign | -0.379 | Destabilizing | 0.012 | N | 0.163 | neutral | N | 0.445597196 | None | None | I |
V/C | 0.7509 | likely_pathogenic | 0.7668 | pathogenic | -0.783 | Destabilizing | 0.993 | D | 0.375 | neutral | None | None | None | None | I |
V/D | 0.5357 | ambiguous | 0.556 | ambiguous | -0.321 | Destabilizing | 0.966 | D | 0.429 | neutral | N | 0.446925348 | None | None | I |
V/E | 0.4594 | ambiguous | 0.4763 | ambiguous | -0.427 | Destabilizing | 0.949 | D | 0.417 | neutral | None | None | None | None | I |
V/F | 0.2659 | likely_benign | 0.2655 | benign | -0.631 | Destabilizing | 0.934 | D | 0.401 | neutral | N | 0.519806953 | None | None | I |
V/G | 0.2705 | likely_benign | 0.2799 | benign | -0.473 | Destabilizing | 0.669 | D | 0.426 | neutral | N | 0.431707966 | None | None | I |
V/H | 0.6946 | likely_pathogenic | 0.7147 | pathogenic | 0.008 | Stabilizing | 0.998 | D | 0.399 | neutral | None | None | None | None | I |
V/I | 0.0815 | likely_benign | 0.0802 | benign | -0.275 | Destabilizing | 0.022 | N | 0.141 | neutral | N | 0.436633783 | None | None | I |
V/K | 0.5616 | ambiguous | 0.6094 | pathogenic | -0.437 | Destabilizing | 0.949 | D | 0.415 | neutral | None | None | None | None | I |
V/L | 0.2003 | likely_benign | 0.2006 | benign | -0.275 | Destabilizing | 0.267 | N | 0.27 | neutral | N | 0.417815949 | None | None | I |
V/M | 0.1867 | likely_benign | 0.1819 | benign | -0.553 | Destabilizing | 0.325 | N | 0.298 | neutral | None | None | None | None | I |
V/N | 0.3426 | ambiguous | 0.3753 | ambiguous | -0.266 | Destabilizing | 0.974 | D | 0.417 | neutral | None | None | None | None | I |
V/P | 0.4845 | ambiguous | 0.5189 | ambiguous | -0.279 | Destabilizing | 0.974 | D | 0.437 | neutral | None | None | None | None | I |
V/Q | 0.4235 | ambiguous | 0.462 | ambiguous | -0.47 | Destabilizing | 0.974 | D | 0.425 | neutral | None | None | None | None | I |
V/R | 0.4776 | ambiguous | 0.5249 | ambiguous | 0.04 | Stabilizing | 0.974 | D | 0.423 | neutral | None | None | None | None | I |
V/S | 0.242 | likely_benign | 0.2573 | benign | -0.588 | Destabilizing | 0.728 | D | 0.453 | neutral | None | None | None | None | I |
V/T | 0.2427 | likely_benign | 0.2648 | benign | -0.597 | Destabilizing | 0.842 | D | 0.4 | neutral | None | None | None | None | I |
V/W | 0.8845 | likely_pathogenic | 0.8883 | pathogenic | -0.7 | Destabilizing | 0.998 | D | 0.516 | neutral | None | None | None | None | I |
V/Y | 0.6126 | likely_pathogenic | 0.6485 | pathogenic | -0.423 | Destabilizing | 0.991 | D | 0.391 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.