Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29776 | 89551;89552;89553 | chr2:178553679;178553678;178553677 | chr2:179418406;179418405;179418404 |
N2AB | 28135 | 84628;84629;84630 | chr2:178553679;178553678;178553677 | chr2:179418406;179418405;179418404 |
N2A | 27208 | 81847;81848;81849 | chr2:178553679;178553678;178553677 | chr2:179418406;179418405;179418404 |
N2B | 20711 | 62356;62357;62358 | chr2:178553679;178553678;178553677 | chr2:179418406;179418405;179418404 |
Novex-1 | 20836 | 62731;62732;62733 | chr2:178553679;178553678;178553677 | chr2:179418406;179418405;179418404 |
Novex-2 | 20903 | 62932;62933;62934 | chr2:178553679;178553678;178553677 | chr2:179418406;179418405;179418404 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 0.012 | N | 0.535 | 0.085 | 0.17948927462 | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1244 | likely_benign | 0.1244 | benign | -0.692 | Destabilizing | 0.022 | N | 0.243 | neutral | N | 0.432398613 | None | None | N |
G/C | 0.2646 | likely_benign | 0.2684 | benign | -0.753 | Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | N |
G/D | 0.1746 | likely_benign | 0.1705 | benign | -1.223 | Destabilizing | 0.728 | D | 0.581 | neutral | None | None | None | None | N |
G/E | 0.1678 | likely_benign | 0.1694 | benign | -1.294 | Destabilizing | 0.012 | N | 0.535 | neutral | N | 0.418045236 | None | None | N |
G/F | 0.636 | likely_pathogenic | 0.6466 | pathogenic | -1.012 | Destabilizing | 0.949 | D | 0.69 | prob.neutral | None | None | None | None | N |
G/H | 0.4401 | ambiguous | 0.4536 | ambiguous | -1.341 | Destabilizing | 0.993 | D | 0.62 | neutral | None | None | None | None | N |
G/I | 0.3169 | likely_benign | 0.3434 | ambiguous | -0.36 | Destabilizing | 0.904 | D | 0.669 | neutral | None | None | None | None | N |
G/K | 0.3722 | ambiguous | 0.3909 | ambiguous | -1.366 | Destabilizing | 0.728 | D | 0.615 | neutral | None | None | None | None | N |
G/L | 0.3693 | ambiguous | 0.3873 | ambiguous | -0.36 | Destabilizing | 0.016 | N | 0.578 | neutral | None | None | None | None | N |
G/M | 0.4222 | ambiguous | 0.4492 | ambiguous | -0.27 | Destabilizing | 0.949 | D | 0.649 | neutral | None | None | None | None | N |
G/N | 0.2422 | likely_benign | 0.2445 | benign | -0.913 | Destabilizing | 0.842 | D | 0.586 | neutral | None | None | None | None | N |
G/P | 0.6262 | likely_pathogenic | 0.6493 | pathogenic | -0.431 | Destabilizing | 0.974 | D | 0.652 | neutral | None | None | None | None | N |
G/Q | 0.326 | likely_benign | 0.3431 | ambiguous | -1.113 | Destabilizing | 0.904 | D | 0.658 | neutral | None | None | None | None | N |
G/R | 0.3348 | likely_benign | 0.3448 | ambiguous | -0.994 | Destabilizing | 0.934 | D | 0.653 | neutral | N | 0.460009288 | None | None | N |
G/S | 0.1185 | likely_benign | 0.1183 | benign | -1.111 | Destabilizing | 0.172 | N | 0.401 | neutral | None | None | None | None | N |
G/T | 0.1746 | likely_benign | 0.1811 | benign | -1.114 | Destabilizing | 0.067 | N | 0.535 | neutral | None | None | None | None | N |
G/V | 0.2159 | likely_benign | 0.2284 | benign | -0.431 | Destabilizing | 0.669 | D | 0.636 | neutral | N | 0.434033408 | None | None | N |
G/W | 0.4568 | ambiguous | 0.4778 | ambiguous | -1.376 | Destabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | N |
G/Y | 0.4697 | ambiguous | 0.4789 | ambiguous | -0.986 | Destabilizing | 0.991 | D | 0.669 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.