Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29805 | 89638;89639;89640 | chr2:178553592;178553591;178553590 | chr2:179418319;179418318;179418317 |
N2AB | 28164 | 84715;84716;84717 | chr2:178553592;178553591;178553590 | chr2:179418319;179418318;179418317 |
N2A | 27237 | 81934;81935;81936 | chr2:178553592;178553591;178553590 | chr2:179418319;179418318;179418317 |
N2B | 20740 | 62443;62444;62445 | chr2:178553592;178553591;178553590 | chr2:179418319;179418318;179418317 |
Novex-1 | 20865 | 62818;62819;62820 | chr2:178553592;178553591;178553590 | chr2:179418319;179418318;179418317 |
Novex-2 | 20932 | 63019;63020;63021 | chr2:178553592;178553591;178553590 | chr2:179418319;179418318;179418317 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs369285180 | -0.618 | 0.027 | N | 0.402 | 0.206 | None | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.56E-05 | 0 |
N/S | rs369285180 | -0.618 | 0.027 | N | 0.402 | 0.206 | None | gnomAD-3.1.2 | 3.28E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
N/S | rs369285180 | -0.618 | 0.027 | N | 0.402 | 0.206 | None | gnomAD-4.0.0 | 1.04102E-04 | None | None | None | None | N | None | 5.33775E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.39004E-04 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2057 | likely_benign | 0.205 | benign | -1.045 | Destabilizing | 0.149 | N | 0.484 | neutral | None | None | None | None | N |
N/C | 0.2895 | likely_benign | 0.2855 | benign | -0.051 | Destabilizing | 0.935 | D | 0.587 | neutral | None | None | None | None | N |
N/D | 0.0936 | likely_benign | 0.0852 | benign | -0.326 | Destabilizing | None | N | 0.115 | neutral | N | 0.437345859 | None | None | N |
N/E | 0.2763 | likely_benign | 0.2707 | benign | -0.186 | Destabilizing | 0.035 | N | 0.377 | neutral | None | None | None | None | N |
N/F | 0.4994 | ambiguous | 0.47 | ambiguous | -0.656 | Destabilizing | 0.081 | N | 0.579 | neutral | None | None | None | None | N |
N/G | 0.3058 | likely_benign | 0.3077 | benign | -1.413 | Destabilizing | 0.067 | N | 0.407 | neutral | None | None | None | None | N |
N/H | 0.1237 | likely_benign | 0.1148 | benign | -0.901 | Destabilizing | None | N | 0.199 | neutral | N | 0.472594583 | None | None | N |
N/I | 0.2181 | likely_benign | 0.2139 | benign | -0.085 | Destabilizing | 0.484 | N | 0.579 | neutral | N | 0.453739464 | None | None | N |
N/K | 0.2941 | likely_benign | 0.2857 | benign | -0.117 | Destabilizing | 0.117 | N | 0.381 | neutral | N | 0.419874819 | None | None | N |
N/L | 0.2288 | likely_benign | 0.2337 | benign | -0.085 | Destabilizing | 0.149 | N | 0.519 | neutral | None | None | None | None | N |
N/M | 0.3449 | ambiguous | 0.3337 | benign | 0.247 | Stabilizing | 0.935 | D | 0.567 | neutral | None | None | None | None | N |
N/P | 0.3232 | likely_benign | 0.3422 | ambiguous | -0.376 | Destabilizing | 0.555 | D | 0.575 | neutral | None | None | None | None | N |
N/Q | 0.3009 | likely_benign | 0.2998 | benign | -0.621 | Destabilizing | 0.38 | N | 0.495 | neutral | None | None | None | None | N |
N/R | 0.3418 | ambiguous | 0.3433 | ambiguous | -0.175 | Destabilizing | 0.149 | N | 0.495 | neutral | None | None | None | None | N |
N/S | 0.0876 | likely_benign | 0.0888 | benign | -0.892 | Destabilizing | 0.027 | N | 0.402 | neutral | N | 0.393805726 | None | None | N |
N/T | 0.135 | likely_benign | 0.1284 | benign | -0.544 | Destabilizing | 0.117 | N | 0.381 | neutral | N | 0.416258511 | None | None | N |
N/V | 0.2284 | likely_benign | 0.224 | benign | -0.376 | Destabilizing | 0.149 | N | 0.561 | neutral | None | None | None | None | N |
N/W | 0.6914 | likely_pathogenic | 0.6914 | pathogenic | -0.357 | Destabilizing | 0.824 | D | 0.585 | neutral | None | None | None | None | N |
N/Y | 0.1504 | likely_benign | 0.1364 | benign | -0.154 | Destabilizing | 0.001 | N | 0.284 | neutral | N | 0.457491845 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.