Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29806 | 89641;89642;89643 | chr2:178553589;178553588;178553587 | chr2:179418316;179418315;179418314 |
N2AB | 28165 | 84718;84719;84720 | chr2:178553589;178553588;178553587 | chr2:179418316;179418315;179418314 |
N2A | 27238 | 81937;81938;81939 | chr2:178553589;178553588;178553587 | chr2:179418316;179418315;179418314 |
N2B | 20741 | 62446;62447;62448 | chr2:178553589;178553588;178553587 | chr2:179418316;179418315;179418314 |
Novex-1 | 20866 | 62821;62822;62823 | chr2:178553589;178553588;178553587 | chr2:179418316;179418315;179418314 |
Novex-2 | 20933 | 63022;63023;63024 | chr2:178553589;178553588;178553587 | chr2:179418316;179418315;179418314 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | rs982322225 | -3.489 | 1.0 | D | 0.883 | 0.928 | 0.941281488252 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/D | rs982322225 | -3.489 | 1.0 | D | 0.883 | 0.928 | 0.941281488252 | gnomAD-4.0.0 | 1.59115E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9567 | likely_pathogenic | 0.9573 | pathogenic | -2.795 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/C | 0.5758 | likely_pathogenic | 0.5991 | pathogenic | -1.573 | Destabilizing | 1.0 | D | 0.872 | deleterious | D | 0.625574306 | None | None | N |
Y/D | 0.9621 | likely_pathogenic | 0.96 | pathogenic | -3.563 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.667131778 | None | None | N |
Y/E | 0.9914 | likely_pathogenic | 0.9922 | pathogenic | -3.339 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/F | 0.2944 | likely_benign | 0.2979 | benign | -1.007 | Destabilizing | 0.999 | D | 0.756 | deleterious | D | 0.597059132 | None | None | N |
Y/G | 0.9135 | likely_pathogenic | 0.9123 | pathogenic | -3.217 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Y/H | 0.8224 | likely_pathogenic | 0.8388 | pathogenic | -2.076 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | D | 0.667131778 | None | None | N |
Y/I | 0.9016 | likely_pathogenic | 0.9144 | pathogenic | -1.386 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Y/K | 0.9908 | likely_pathogenic | 0.9914 | pathogenic | -2.241 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Y/L | 0.8597 | likely_pathogenic | 0.8698 | pathogenic | -1.386 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
Y/M | 0.9524 | likely_pathogenic | 0.9585 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Y/N | 0.7806 | likely_pathogenic | 0.7887 | pathogenic | -3.167 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.666929974 | None | None | N |
Y/P | 0.9954 | likely_pathogenic | 0.9947 | pathogenic | -1.872 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
Y/Q | 0.9803 | likely_pathogenic | 0.9827 | pathogenic | -2.84 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
Y/R | 0.9634 | likely_pathogenic | 0.9664 | pathogenic | -2.189 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/S | 0.8387 | likely_pathogenic | 0.8443 | pathogenic | -3.413 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.667131778 | None | None | N |
Y/T | 0.9259 | likely_pathogenic | 0.9343 | pathogenic | -3.061 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/V | 0.8247 | likely_pathogenic | 0.8452 | pathogenic | -1.872 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Y/W | 0.7992 | likely_pathogenic | 0.8197 | pathogenic | -0.362 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.