Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29828 | 89707;89708;89709 | chr2:178553523;178553522;178553521 | chr2:179418250;179418249;179418248 |
N2AB | 28187 | 84784;84785;84786 | chr2:178553523;178553522;178553521 | chr2:179418250;179418249;179418248 |
N2A | 27260 | 82003;82004;82005 | chr2:178553523;178553522;178553521 | chr2:179418250;179418249;179418248 |
N2B | 20763 | 62512;62513;62514 | chr2:178553523;178553522;178553521 | chr2:179418250;179418249;179418248 |
Novex-1 | 20888 | 62887;62888;62889 | chr2:178553523;178553522;178553521 | chr2:179418250;179418249;179418248 |
Novex-2 | 20955 | 63088;63089;63090 | chr2:178553523;178553522;178553521 | chr2:179418250;179418249;179418248 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.325 | 0.14 | 0.297718772494 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1378 | likely_benign | 0.1149 | benign | -1.749 | Destabilizing | None | N | 0.323 | neutral | N | 0.491003522 | None | None | N |
V/C | 0.6014 | likely_pathogenic | 0.5642 | pathogenic | -1.118 | Destabilizing | 0.823 | D | 0.707 | prob.delet. | None | None | None | None | N |
V/D | 0.6041 | likely_pathogenic | 0.526 | ambiguous | -2.277 | Highly Destabilizing | 0.378 | N | 0.878 | deleterious | None | None | None | None | N |
V/E | 0.3761 | ambiguous | 0.3412 | ambiguous | -2.049 | Highly Destabilizing | 0.314 | N | 0.779 | deleterious | N | 0.507248126 | None | None | N |
V/F | 0.1972 | likely_benign | 0.1787 | benign | -1.057 | Destabilizing | 0.378 | N | 0.741 | deleterious | None | None | None | None | N |
V/G | 0.267 | likely_benign | 0.232 | benign | -2.265 | Highly Destabilizing | 0.061 | N | 0.764 | deleterious | N | 0.519275995 | None | None | N |
V/H | 0.5632 | ambiguous | 0.521 | ambiguous | -1.888 | Destabilizing | 0.934 | D | 0.843 | deleterious | None | None | None | None | N |
V/I | 0.0916 | likely_benign | 0.0863 | benign | -0.313 | Destabilizing | None | N | 0.325 | neutral | N | 0.495428584 | None | None | N |
V/K | 0.3735 | ambiguous | 0.3572 | ambiguous | -1.394 | Destabilizing | 0.378 | N | 0.787 | deleterious | None | None | None | None | N |
V/L | 0.2281 | likely_benign | 0.2049 | benign | -0.313 | Destabilizing | 0.026 | N | 0.569 | neutral | N | 0.47571997 | None | None | N |
V/M | 0.18 | likely_benign | 0.1604 | benign | -0.304 | Destabilizing | 0.378 | N | 0.659 | prob.neutral | None | None | None | None | N |
V/N | 0.4188 | ambiguous | 0.3738 | ambiguous | -1.765 | Destabilizing | 0.552 | D | 0.875 | deleterious | None | None | None | None | N |
V/P | 0.8557 | likely_pathogenic | 0.7904 | pathogenic | -0.766 | Destabilizing | 0.378 | N | 0.813 | deleterious | None | None | None | None | N |
V/Q | 0.3017 | likely_benign | 0.2879 | benign | -1.603 | Destabilizing | 0.552 | D | 0.807 | deleterious | None | None | None | None | N |
V/R | 0.3168 | likely_benign | 0.3165 | benign | -1.288 | Destabilizing | 0.378 | N | 0.878 | deleterious | None | None | None | None | N |
V/S | 0.2208 | likely_benign | 0.1997 | benign | -2.352 | Highly Destabilizing | 0.08 | N | 0.731 | deleterious | None | None | None | None | N |
V/T | 0.1716 | likely_benign | 0.1466 | benign | -1.972 | Destabilizing | 0.08 | N | 0.604 | neutral | None | None | None | None | N |
V/W | 0.8515 | likely_pathogenic | 0.8035 | pathogenic | -1.52 | Destabilizing | 0.934 | D | 0.787 | deleterious | None | None | None | None | N |
V/Y | 0.5336 | ambiguous | 0.4693 | ambiguous | -1.078 | Destabilizing | 0.552 | D | 0.721 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.