Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29861 | 89806;89807;89808 | chr2:178553319;178553318;178553317 | chr2:179418046;179418045;179418044 |
N2AB | 28220 | 84883;84884;84885 | chr2:178553319;178553318;178553317 | chr2:179418046;179418045;179418044 |
N2A | 27293 | 82102;82103;82104 | chr2:178553319;178553318;178553317 | chr2:179418046;179418045;179418044 |
N2B | 20796 | 62611;62612;62613 | chr2:178553319;178553318;178553317 | chr2:179418046;179418045;179418044 |
Novex-1 | 20921 | 62986;62987;62988 | chr2:178553319;178553318;178553317 | chr2:179418046;179418045;179418044 |
Novex-2 | 20988 | 63187;63188;63189 | chr2:178553319;178553318;178553317 | chr2:179418046;179418045;179418044 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs1384879576 | -1.434 | 0.497 | N | 0.696 | 0.191 | 0.461144880706 | gnomAD-2.1.1 | 4.12E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/F | rs1384879576 | -1.434 | 0.497 | N | 0.696 | 0.191 | 0.461144880706 | gnomAD-4.0.0 | 1.37576E-06 | None | None | None | None | N | None | 0 | 2.23644E-05 | None | 0 | 0 | None | 0 | 1.73491E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9178 | likely_pathogenic | 0.9017 | pathogenic | -1.998 | Destabilizing | 0.157 | N | 0.755 | deleterious | None | None | None | None | N |
I/C | 0.9202 | likely_pathogenic | 0.9132 | pathogenic | -1.301 | Destabilizing | 0.909 | D | 0.773 | deleterious | None | None | None | None | N |
I/D | 0.9974 | likely_pathogenic | 0.9963 | pathogenic | -1.594 | Destabilizing | 0.726 | D | 0.859 | deleterious | None | None | None | None | N |
I/E | 0.9915 | likely_pathogenic | 0.9894 | pathogenic | -1.421 | Destabilizing | 0.726 | D | 0.858 | deleterious | None | None | None | None | N |
I/F | 0.4674 | ambiguous | 0.421 | ambiguous | -1.123 | Destabilizing | 0.497 | N | 0.696 | prob.neutral | N | 0.470758176 | None | None | N |
I/G | 0.9877 | likely_pathogenic | 0.9847 | pathogenic | -2.464 | Highly Destabilizing | 0.726 | D | 0.851 | deleterious | None | None | None | None | N |
I/H | 0.9761 | likely_pathogenic | 0.9665 | pathogenic | -1.543 | Destabilizing | 0.968 | D | 0.868 | deleterious | None | None | None | None | N |
I/K | 0.9782 | likely_pathogenic | 0.9714 | pathogenic | -1.431 | Destabilizing | 0.726 | D | 0.857 | deleterious | None | None | None | None | N |
I/L | 0.238 | likely_benign | 0.222 | benign | -0.697 | Destabilizing | None | N | 0.352 | neutral | N | 0.455754566 | None | None | N |
I/M | 0.3043 | likely_benign | 0.2926 | benign | -0.657 | Destabilizing | 0.497 | N | 0.665 | neutral | N | 0.462617874 | None | None | N |
I/N | 0.9558 | likely_pathogenic | 0.9416 | pathogenic | -1.66 | Destabilizing | 0.859 | D | 0.848 | deleterious | N | 0.48936941 | None | None | N |
I/P | 0.9891 | likely_pathogenic | 0.9839 | pathogenic | -1.107 | Destabilizing | 0.89 | D | 0.853 | deleterious | None | None | None | None | N |
I/Q | 0.9718 | likely_pathogenic | 0.9651 | pathogenic | -1.575 | Destabilizing | 0.89 | D | 0.869 | deleterious | None | None | None | None | N |
I/R | 0.9678 | likely_pathogenic | 0.9572 | pathogenic | -1.097 | Destabilizing | 0.726 | D | 0.845 | deleterious | None | None | None | None | N |
I/S | 0.9288 | likely_pathogenic | 0.914 | pathogenic | -2.382 | Highly Destabilizing | 0.497 | N | 0.815 | deleterious | N | 0.470758176 | None | None | N |
I/T | 0.9351 | likely_pathogenic | 0.9158 | pathogenic | -2.058 | Highly Destabilizing | 0.124 | N | 0.783 | deleterious | N | 0.458894891 | None | None | N |
I/V | 0.1656 | likely_benign | 0.1579 | benign | -1.107 | Destabilizing | 0.001 | N | 0.322 | neutral | N | 0.399024253 | None | None | N |
I/W | 0.9782 | likely_pathogenic | 0.9683 | pathogenic | -1.314 | Destabilizing | 0.968 | D | 0.864 | deleterious | None | None | None | None | N |
I/Y | 0.9038 | likely_pathogenic | 0.8773 | pathogenic | -1.036 | Destabilizing | 0.726 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.