Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29870 | 89833;89834;89835 | chr2:178553292;178553291;178553290 | chr2:179418019;179418018;179418017 |
N2AB | 28229 | 84910;84911;84912 | chr2:178553292;178553291;178553290 | chr2:179418019;179418018;179418017 |
N2A | 27302 | 82129;82130;82131 | chr2:178553292;178553291;178553290 | chr2:179418019;179418018;179418017 |
N2B | 20805 | 62638;62639;62640 | chr2:178553292;178553291;178553290 | chr2:179418019;179418018;179418017 |
Novex-1 | 20930 | 63013;63014;63015 | chr2:178553292;178553291;178553290 | chr2:179418019;179418018;179418017 |
Novex-2 | 20997 | 63214;63215;63216 | chr2:178553292;178553291;178553290 | chr2:179418019;179418018;179418017 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs372796632 | -0.565 | 0.454 | N | 0.39 | 0.208 | None | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
T/A | rs372796632 | -0.565 | 0.454 | N | 0.39 | 0.208 | None | gnomAD-4.0.0 | 6.86391E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99475E-07 | 0 | 0 |
T/P | None | None | 0.966 | D | 0.524 | 0.585 | 0.557713733399 | gnomAD-4.0.0 | 6.86391E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7343E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0693 | likely_benign | 0.0676 | benign | -0.561 | Destabilizing | 0.454 | N | 0.39 | neutral | N | 0.503101997 | None | None | N |
T/C | 0.34 | ambiguous | 0.3549 | ambiguous | -0.525 | Destabilizing | 0.998 | D | 0.546 | neutral | None | None | None | None | N |
T/D | 0.3571 | ambiguous | 0.333 | benign | 0.082 | Stabilizing | 0.728 | D | 0.434 | neutral | None | None | None | None | N |
T/E | 0.2419 | likely_benign | 0.224 | benign | 0.073 | Stabilizing | 0.842 | D | 0.426 | neutral | None | None | None | None | N |
T/F | 0.2246 | likely_benign | 0.2139 | benign | -0.808 | Destabilizing | 0.991 | D | 0.645 | neutral | None | None | None | None | N |
T/G | 0.237 | likely_benign | 0.2317 | benign | -0.78 | Destabilizing | 0.525 | D | 0.469 | neutral | None | None | None | None | N |
T/H | 0.2003 | likely_benign | 0.194 | benign | -0.986 | Destabilizing | 0.974 | D | 0.643 | neutral | None | None | None | None | N |
T/I | 0.122 | likely_benign | 0.1122 | benign | -0.084 | Destabilizing | 0.966 | D | 0.531 | neutral | D | 0.522381191 | None | None | N |
T/K | 0.149 | likely_benign | 0.1427 | benign | -0.527 | Destabilizing | 0.842 | D | 0.424 | neutral | None | None | None | None | N |
T/L | 0.0818 | likely_benign | 0.0796 | benign | -0.084 | Destabilizing | 0.842 | D | 0.427 | neutral | None | None | None | None | N |
T/M | 0.0891 | likely_benign | 0.0857 | benign | -0.116 | Destabilizing | 0.998 | D | 0.539 | neutral | None | None | None | None | N |
T/N | 0.0992 | likely_benign | 0.0971 | benign | -0.517 | Destabilizing | 0.022 | N | 0.154 | neutral | N | 0.475531393 | None | None | N |
T/P | 0.4287 | ambiguous | 0.3987 | ambiguous | -0.211 | Destabilizing | 0.966 | D | 0.524 | neutral | D | 0.525423693 | None | None | N |
T/Q | 0.1741 | likely_benign | 0.1726 | benign | -0.61 | Destabilizing | 0.974 | D | 0.541 | neutral | None | None | None | None | N |
T/R | 0.1382 | likely_benign | 0.134 | benign | -0.315 | Destabilizing | 0.949 | D | 0.513 | neutral | None | None | None | None | N |
T/S | 0.096 | likely_benign | 0.0952 | benign | -0.753 | Destabilizing | 0.051 | N | 0.193 | neutral | N | 0.461887305 | None | None | N |
T/V | 0.0945 | likely_benign | 0.0911 | benign | -0.211 | Destabilizing | 0.842 | D | 0.376 | neutral | None | None | None | None | N |
T/W | 0.6003 | likely_pathogenic | 0.5795 | pathogenic | -0.813 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/Y | 0.2456 | likely_benign | 0.2381 | benign | -0.528 | Destabilizing | 0.991 | D | 0.646 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.