Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29871 | 89836;89837;89838 | chr2:178553289;178553288;178553287 | chr2:179418016;179418015;179418014 |
N2AB | 28230 | 84913;84914;84915 | chr2:178553289;178553288;178553287 | chr2:179418016;179418015;179418014 |
N2A | 27303 | 82132;82133;82134 | chr2:178553289;178553288;178553287 | chr2:179418016;179418015;179418014 |
N2B | 20806 | 62641;62642;62643 | chr2:178553289;178553288;178553287 | chr2:179418016;179418015;179418014 |
Novex-1 | 20931 | 63016;63017;63018 | chr2:178553289;178553288;178553287 | chr2:179418016;179418015;179418014 |
Novex-2 | 20998 | 63217;63218;63219 | chr2:178553289;178553288;178553287 | chr2:179418016;179418015;179418014 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | D | 0.631 | 0.437 | None | gnomAD-4.0.0 | 2.40066E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62502E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3528 | ambiguous | 0.3286 | benign | -1.702 | Destabilizing | 0.999 | D | 0.631 | neutral | D | 0.541350384 | None | None | N |
V/C | 0.8382 | likely_pathogenic | 0.8532 | pathogenic | -1.2 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
V/D | 0.968 | likely_pathogenic | 0.9641 | pathogenic | -1.559 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.63592176 | None | None | N |
V/E | 0.9175 | likely_pathogenic | 0.9133 | pathogenic | -1.481 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/F | 0.5974 | likely_pathogenic | 0.5876 | pathogenic | -1.171 | Destabilizing | 1.0 | D | 0.799 | deleterious | D | 0.566222363 | None | None | N |
V/G | 0.6613 | likely_pathogenic | 0.6304 | pathogenic | -2.114 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.63592176 | None | None | N |
V/H | 0.9609 | likely_pathogenic | 0.9635 | pathogenic | -1.707 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/I | 0.0995 | likely_benign | 0.0996 | benign | -0.634 | Destabilizing | 0.997 | D | 0.588 | neutral | N | 0.464263968 | None | None | N |
V/K | 0.8888 | likely_pathogenic | 0.896 | pathogenic | -1.44 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/L | 0.5069 | ambiguous | 0.5117 | ambiguous | -0.634 | Destabilizing | 0.997 | D | 0.653 | neutral | D | 0.55668397 | None | None | N |
V/M | 0.3764 | ambiguous | 0.3659 | ambiguous | -0.516 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
V/N | 0.8941 | likely_pathogenic | 0.8934 | pathogenic | -1.362 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/P | 0.9264 | likely_pathogenic | 0.9088 | pathogenic | -0.956 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/Q | 0.8763 | likely_pathogenic | 0.8813 | pathogenic | -1.406 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/R | 0.8524 | likely_pathogenic | 0.8588 | pathogenic | -1.047 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/S | 0.6443 | likely_pathogenic | 0.6315 | pathogenic | -1.968 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/T | 0.5251 | ambiguous | 0.5186 | ambiguous | -1.759 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
V/W | 0.9839 | likely_pathogenic | 0.9825 | pathogenic | -1.471 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/Y | 0.9204 | likely_pathogenic | 0.9219 | pathogenic | -1.138 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.