Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29877 | 89854;89855;89856 | chr2:178553271;178553270;178553269 | chr2:179417998;179417997;179417996 |
N2AB | 28236 | 84931;84932;84933 | chr2:178553271;178553270;178553269 | chr2:179417998;179417997;179417996 |
N2A | 27309 | 82150;82151;82152 | chr2:178553271;178553270;178553269 | chr2:179417998;179417997;179417996 |
N2B | 20812 | 62659;62660;62661 | chr2:178553271;178553270;178553269 | chr2:179417998;179417997;179417996 |
Novex-1 | 20937 | 63034;63035;63036 | chr2:178553271;178553270;178553269 | chr2:179417998;179417997;179417996 |
Novex-2 | 21004 | 63235;63236;63237 | chr2:178553271;178553270;178553269 | chr2:179417998;179417997;179417996 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs767080000 | -0.028 | 0.004 | N | 0.181 | 0.083 | 0.166414681773 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.41849E-04 | None | 0 | None | 0 | 0 | 0 |
E/D | rs767080000 | -0.028 | 0.004 | N | 0.181 | 0.083 | 0.166414681773 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92604E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs767080000 | -0.028 | 0.004 | N | 0.181 | 0.083 | 0.166414681773 | gnomAD-4.0.0 | 6.57091E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.92604E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1791 | likely_benign | 0.1816 | benign | -0.085 | Destabilizing | 0.896 | D | 0.394 | neutral | N | 0.489051611 | None | None | N |
E/C | 0.801 | likely_pathogenic | 0.8103 | pathogenic | -0.091 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | N |
E/D | 0.0844 | likely_benign | 0.0844 | benign | -0.187 | Destabilizing | 0.004 | N | 0.181 | neutral | N | 0.384345589 | None | None | N |
E/F | 0.7523 | likely_pathogenic | 0.7432 | pathogenic | -0.06 | Destabilizing | 0.996 | D | 0.555 | neutral | None | None | None | None | N |
E/G | 0.0898 | likely_benign | 0.0937 | benign | -0.235 | Destabilizing | 0.896 | D | 0.413 | neutral | N | 0.347704424 | None | None | N |
E/H | 0.401 | ambiguous | 0.4225 | ambiguous | 0.416 | Stabilizing | 0.996 | D | 0.367 | neutral | None | None | None | None | N |
E/I | 0.4067 | ambiguous | 0.4016 | ambiguous | 0.259 | Stabilizing | 0.988 | D | 0.543 | neutral | None | None | None | None | N |
E/K | 0.1356 | likely_benign | 0.1423 | benign | 0.426 | Stabilizing | 0.896 | D | 0.427 | neutral | N | 0.465558676 | None | None | N |
E/L | 0.4402 | ambiguous | 0.4382 | ambiguous | 0.259 | Stabilizing | 0.988 | D | 0.541 | neutral | None | None | None | None | N |
E/M | 0.4615 | ambiguous | 0.4526 | ambiguous | 0.111 | Stabilizing | 0.999 | D | 0.489 | neutral | None | None | None | None | N |
E/N | 0.1613 | likely_benign | 0.1748 | benign | 0.194 | Stabilizing | 0.851 | D | 0.367 | neutral | None | None | None | None | N |
E/P | 0.6027 | likely_pathogenic | 0.6138 | pathogenic | 0.164 | Stabilizing | 0.988 | D | 0.398 | neutral | None | None | None | None | N |
E/Q | 0.1375 | likely_benign | 0.1436 | benign | 0.217 | Stabilizing | 0.946 | D | 0.399 | neutral | N | 0.502154194 | None | None | N |
E/R | 0.2387 | likely_benign | 0.2527 | benign | 0.659 | Stabilizing | 0.988 | D | 0.382 | neutral | None | None | None | None | N |
E/S | 0.1622 | likely_benign | 0.1676 | benign | 0.026 | Stabilizing | 0.919 | D | 0.396 | neutral | None | None | None | None | N |
E/T | 0.2065 | likely_benign | 0.213 | benign | 0.152 | Stabilizing | 0.959 | D | 0.385 | neutral | None | None | None | None | N |
E/V | 0.2748 | likely_benign | 0.2698 | benign | 0.164 | Stabilizing | 0.984 | D | 0.431 | neutral | N | 0.467657531 | None | None | N |
E/W | 0.8618 | likely_pathogenic | 0.8518 | pathogenic | 0.018 | Stabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
E/Y | 0.588 | likely_pathogenic | 0.5816 | pathogenic | 0.172 | Stabilizing | 0.996 | D | 0.481 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.