Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29887 | 89884;89885;89886 | chr2:178553241;178553240;178553239 | chr2:179417968;179417967;179417966 |
N2AB | 28246 | 84961;84962;84963 | chr2:178553241;178553240;178553239 | chr2:179417968;179417967;179417966 |
N2A | 27319 | 82180;82181;82182 | chr2:178553241;178553240;178553239 | chr2:179417968;179417967;179417966 |
N2B | 20822 | 62689;62690;62691 | chr2:178553241;178553240;178553239 | chr2:179417968;179417967;179417966 |
Novex-1 | 20947 | 63064;63065;63066 | chr2:178553241;178553240;178553239 | chr2:179417968;179417967;179417966 |
Novex-2 | 21014 | 63265;63266;63267 | chr2:178553241;178553240;178553239 | chr2:179417968;179417967;179417966 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.012 | N | 0.281 | 0.12 | 0.266843984389 | gnomAD-4.0.0 | 1.59251E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77285E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0793 | likely_benign | 0.0812 | benign | -0.458 | Destabilizing | None | N | 0.115 | neutral | None | None | None | None | N |
S/C | 0.0785 | likely_benign | 0.0745 | benign | -0.409 | Destabilizing | 0.56 | D | 0.477 | neutral | D | 0.527019006 | None | None | N |
S/D | 0.1981 | likely_benign | 0.1713 | benign | 0.461 | Stabilizing | 0.016 | N | 0.275 | neutral | None | None | None | None | N |
S/E | 0.2547 | likely_benign | 0.2297 | benign | 0.433 | Stabilizing | 0.016 | N | 0.277 | neutral | None | None | None | None | N |
S/F | 0.1423 | likely_benign | 0.1465 | benign | -0.774 | Destabilizing | 0.214 | N | 0.552 | neutral | None | None | None | None | N |
S/G | 0.0956 | likely_benign | 0.09 | benign | -0.661 | Destabilizing | 0.012 | N | 0.281 | neutral | N | 0.49148228 | None | None | N |
S/H | 0.106 | likely_benign | 0.096 | benign | -1.102 | Destabilizing | 0.214 | N | 0.479 | neutral | None | None | None | None | N |
S/I | 0.0791 | likely_benign | 0.0723 | benign | -0.042 | Destabilizing | None | N | 0.318 | neutral | N | 0.421987697 | None | None | N |
S/K | 0.203 | likely_benign | 0.1808 | benign | -0.384 | Destabilizing | 0.016 | N | 0.275 | neutral | None | None | None | None | N |
S/L | 0.0876 | likely_benign | 0.0882 | benign | -0.042 | Destabilizing | 0.016 | N | 0.371 | neutral | None | None | None | None | N |
S/M | 0.1354 | likely_benign | 0.1358 | benign | -0.004 | Destabilizing | 0.214 | N | 0.479 | neutral | None | None | None | None | N |
S/N | 0.0668 | likely_benign | 0.0595 | benign | -0.291 | Destabilizing | None | N | 0.109 | neutral | N | 0.425910649 | None | None | N |
S/P | 0.7522 | likely_pathogenic | 0.7234 | pathogenic | -0.148 | Destabilizing | 0.136 | N | 0.46 | neutral | None | None | None | None | N |
S/Q | 0.1902 | likely_benign | 0.1706 | benign | -0.412 | Destabilizing | 0.003 | N | 0.199 | neutral | None | None | None | None | N |
S/R | 0.1641 | likely_benign | 0.1469 | benign | -0.33 | Destabilizing | 0.055 | N | 0.446 | neutral | N | 0.44243754 | None | None | N |
S/T | 0.0589 | likely_benign | 0.062 | benign | -0.372 | Destabilizing | None | N | 0.11 | neutral | N | 0.420755546 | None | None | N |
S/V | 0.1004 | likely_benign | 0.0949 | benign | -0.148 | Destabilizing | 0.016 | N | 0.371 | neutral | None | None | None | None | N |
S/W | 0.2476 | likely_benign | 0.2409 | benign | -0.763 | Destabilizing | 0.864 | D | 0.537 | neutral | None | None | None | None | N |
S/Y | 0.1097 | likely_benign | 0.106 | benign | -0.469 | Destabilizing | 0.628 | D | 0.543 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.