Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29894 | 89905;89906;89907 | chr2:178553220;178553219;178553218 | chr2:179417947;179417946;179417945 |
N2AB | 28253 | 84982;84983;84984 | chr2:178553220;178553219;178553218 | chr2:179417947;179417946;179417945 |
N2A | 27326 | 82201;82202;82203 | chr2:178553220;178553219;178553218 | chr2:179417947;179417946;179417945 |
N2B | 20829 | 62710;62711;62712 | chr2:178553220;178553219;178553218 | chr2:179417947;179417946;179417945 |
Novex-1 | 20954 | 63085;63086;63087 | chr2:178553220;178553219;178553218 | chr2:179417947;179417946;179417945 |
Novex-2 | 21021 | 63286;63287;63288 | chr2:178553220;178553219;178553218 | chr2:179417947;179417946;179417945 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.333 | N | 0.26 | 0.116 | 0.258283824007 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1123 | likely_benign | 0.0926 | benign | -0.882 | Destabilizing | 0.333 | N | 0.26 | neutral | N | 0.490538131 | None | None | N |
S/C | 0.112 | likely_benign | 0.0974 | benign | -0.637 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.487987415 | None | None | N |
S/D | 0.768 | likely_pathogenic | 0.6835 | pathogenic | -0.351 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
S/E | 0.7364 | likely_pathogenic | 0.6815 | pathogenic | -0.314 | Destabilizing | 0.996 | D | 0.567 | neutral | None | None | None | None | N |
S/F | 0.2261 | likely_benign | 0.1728 | benign | -1.061 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | N | 0.454214758 | None | None | N |
S/G | 0.1704 | likely_benign | 0.1365 | benign | -1.148 | Destabilizing | 0.98 | D | 0.5 | neutral | None | None | None | None | N |
S/H | 0.3637 | ambiguous | 0.3315 | benign | -1.624 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
S/I | 0.3114 | likely_benign | 0.2418 | benign | -0.267 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
S/K | 0.7916 | likely_pathogenic | 0.7436 | pathogenic | -0.531 | Destabilizing | 0.996 | D | 0.565 | neutral | None | None | None | None | N |
S/L | 0.1581 | likely_benign | 0.1272 | benign | -0.267 | Destabilizing | 0.992 | D | 0.622 | neutral | None | None | None | None | N |
S/M | 0.2589 | likely_benign | 0.2204 | benign | -0.07 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
S/N | 0.3122 | likely_benign | 0.2579 | benign | -0.629 | Destabilizing | 1.0 | D | 0.598 | neutral | None | None | None | None | N |
S/P | 0.9753 | likely_pathogenic | 0.9555 | pathogenic | -0.439 | Destabilizing | 0.998 | D | 0.72 | prob.delet. | N | 0.492506866 | None | None | N |
S/Q | 0.5569 | ambiguous | 0.533 | ambiguous | -0.735 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
S/R | 0.6772 | likely_pathogenic | 0.6214 | pathogenic | -0.554 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
S/T | 0.1176 | likely_benign | 0.1002 | benign | -0.624 | Destabilizing | 0.989 | D | 0.501 | neutral | N | 0.474491243 | None | None | N |
S/V | 0.2734 | likely_benign | 0.2169 | benign | -0.439 | Destabilizing | 0.992 | D | 0.64 | neutral | None | None | None | None | N |
S/W | 0.4059 | ambiguous | 0.3574 | ambiguous | -1.039 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
S/Y | 0.163 | likely_benign | 0.1323 | benign | -0.74 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | N | 0.44713407 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.