Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2990 | 9193;9194;9195 | chr2:178768868;178768867;178768866 | chr2:179633595;179633594;179633593 |
N2AB | 2990 | 9193;9194;9195 | chr2:178768868;178768867;178768866 | chr2:179633595;179633594;179633593 |
N2A | 2990 | 9193;9194;9195 | chr2:178768868;178768867;178768866 | chr2:179633595;179633594;179633593 |
N2B | 2944 | 9055;9056;9057 | chr2:178768868;178768867;178768866 | chr2:179633595;179633594;179633593 |
Novex-1 | 2944 | 9055;9056;9057 | chr2:178768868;178768867;178768866 | chr2:179633595;179633594;179633593 |
Novex-2 | 2944 | 9055;9056;9057 | chr2:178768868;178768867;178768866 | chr2:179633595;179633594;179633593 |
Novex-3 | 2990 | 9193;9194;9195 | chr2:178768868;178768867;178768866 | chr2:179633595;179633594;179633593 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs746946974 | -0.861 | 1.0 | D | 0.805 | 0.269 | 0.324161360171 | gnomAD-2.1.1 | 2.39E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.4E-05 | 1.63132E-04 |
V/M | rs746946974 | -0.861 | 1.0 | D | 0.805 | 0.269 | 0.324161360171 | gnomAD-4.0.0 | 3.42052E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49652E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7859 | likely_pathogenic | 0.7858 | pathogenic | -2.122 | Highly Destabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.452660053 | None | None | N |
V/C | 0.9201 | likely_pathogenic | 0.9243 | pathogenic | -1.997 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
V/D | 0.9964 | likely_pathogenic | 0.9973 | pathogenic | -3.049 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
V/E | 0.9931 | likely_pathogenic | 0.994 | pathogenic | -2.781 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.536396429 | None | None | N |
V/F | 0.9745 | likely_pathogenic | 0.9675 | pathogenic | -1.22 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/G | 0.8672 | likely_pathogenic | 0.8787 | pathogenic | -2.707 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.536210513 | None | None | N |
V/H | 0.9989 | likely_pathogenic | 0.999 | pathogenic | -2.595 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
V/I | 0.2529 | likely_benign | 0.1998 | benign | -0.457 | Destabilizing | 0.998 | D | 0.549 | neutral | None | None | None | None | N |
V/K | 0.9969 | likely_pathogenic | 0.9973 | pathogenic | -1.707 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/L | 0.9067 | likely_pathogenic | 0.8526 | pathogenic | -0.457 | Destabilizing | 0.997 | D | 0.677 | prob.neutral | N | 0.457870117 | None | None | N |
V/M | 0.841 | likely_pathogenic | 0.8207 | pathogenic | -0.815 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.536210513 | None | None | N |
V/N | 0.9848 | likely_pathogenic | 0.9878 | pathogenic | -2.226 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
V/P | 0.9993 | likely_pathogenic | 0.999 | pathogenic | -0.988 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/Q | 0.9955 | likely_pathogenic | 0.9961 | pathogenic | -1.971 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
V/R | 0.9961 | likely_pathogenic | 0.996 | pathogenic | -1.702 | Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
V/S | 0.9299 | likely_pathogenic | 0.9493 | pathogenic | -2.822 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/T | 0.7872 | likely_pathogenic | 0.8287 | pathogenic | -2.395 | Highly Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/W | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.806 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
V/Y | 0.9968 | likely_pathogenic | 0.9964 | pathogenic | -1.423 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.