Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29900 | 89923;89924;89925 | chr2:178553202;178553201;178553200 | chr2:179417929;179417928;179417927 |
N2AB | 28259 | 85000;85001;85002 | chr2:178553202;178553201;178553200 | chr2:179417929;179417928;179417927 |
N2A | 27332 | 82219;82220;82221 | chr2:178553202;178553201;178553200 | chr2:179417929;179417928;179417927 |
N2B | 20835 | 62728;62729;62730 | chr2:178553202;178553201;178553200 | chr2:179417929;179417928;179417927 |
Novex-1 | 20960 | 63103;63104;63105 | chr2:178553202;178553201;178553200 | chr2:179417929;179417928;179417927 |
Novex-2 | 21027 | 63304;63305;63306 | chr2:178553202;178553201;178553200 | chr2:179417929;179417928;179417927 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1302918553 | -0.734 | 0.032 | N | 0.459 | 0.229 | 0.516162830352 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.66E-05 | 0 |
P/L | rs1302918553 | -0.734 | 0.032 | N | 0.459 | 0.229 | 0.516162830352 | gnomAD-4.0.0 | 8.21064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.89388E-06 | 0 | 1.6564E-05 |
P/R | None | None | 0.971 | N | 0.669 | 0.281 | 0.478527412683 | gnomAD-4.0.0 | 6.8422E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.117 | likely_benign | 0.1005 | benign | -1.567 | Destabilizing | 0.698 | D | 0.468 | neutral | N | 0.503792643 | None | None | N |
P/C | 0.4964 | ambiguous | 0.4333 | ambiguous | -1.177 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
P/D | 0.517 | ambiguous | 0.4698 | ambiguous | -1.358 | Destabilizing | 0.956 | D | 0.574 | neutral | None | None | None | None | N |
P/E | 0.3197 | likely_benign | 0.2893 | benign | -1.356 | Destabilizing | 0.956 | D | 0.567 | neutral | None | None | None | None | N |
P/F | 0.5411 | ambiguous | 0.476 | ambiguous | -1.249 | Destabilizing | 0.915 | D | 0.718 | prob.delet. | None | None | None | None | N |
P/G | 0.3089 | likely_benign | 0.2717 | benign | -1.892 | Destabilizing | 0.86 | D | 0.564 | neutral | None | None | None | None | N |
P/H | 0.1908 | likely_benign | 0.1673 | benign | -1.4 | Destabilizing | 0.997 | D | 0.636 | neutral | D | 0.527997654 | None | None | N |
P/I | 0.3928 | ambiguous | 0.3434 | ambiguous | -0.771 | Destabilizing | 0.915 | D | 0.707 | prob.neutral | None | None | None | None | N |
P/K | 0.2306 | likely_benign | 0.2025 | benign | -1.305 | Destabilizing | 0.956 | D | 0.568 | neutral | None | None | None | None | N |
P/L | 0.1433 | likely_benign | 0.1273 | benign | -0.771 | Destabilizing | 0.032 | N | 0.459 | neutral | N | 0.508083742 | None | None | N |
P/M | 0.3853 | ambiguous | 0.3292 | benign | -0.601 | Destabilizing | 0.988 | D | 0.651 | neutral | None | None | None | None | N |
P/N | 0.327 | likely_benign | 0.2839 | benign | -1.122 | Destabilizing | 0.956 | D | 0.667 | neutral | None | None | None | None | N |
P/Q | 0.1629 | likely_benign | 0.1446 | benign | -1.294 | Destabilizing | 0.978 | D | 0.641 | neutral | None | None | None | None | N |
P/R | 0.1525 | likely_benign | 0.132 | benign | -0.775 | Destabilizing | 0.971 | D | 0.669 | neutral | N | 0.479107629 | None | None | N |
P/S | 0.137 | likely_benign | 0.1205 | benign | -1.683 | Destabilizing | 0.294 | N | 0.287 | neutral | N | 0.462714025 | None | None | N |
P/T | 0.1295 | likely_benign | 0.1138 | benign | -1.566 | Destabilizing | 0.698 | D | 0.517 | neutral | N | 0.493999724 | None | None | N |
P/V | 0.2797 | likely_benign | 0.2438 | benign | -1.001 | Destabilizing | 0.754 | D | 0.58 | neutral | None | None | None | None | N |
P/W | 0.6669 | likely_pathogenic | 0.5978 | pathogenic | -1.423 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | N |
P/Y | 0.4776 | ambiguous | 0.4042 | ambiguous | -1.135 | Destabilizing | 0.978 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.