Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29966 | 90121;90122;90123 | chr2:178553004;178553003;178553002 | chr2:179417731;179417730;179417729 |
N2AB | 28325 | 85198;85199;85200 | chr2:178553004;178553003;178553002 | chr2:179417731;179417730;179417729 |
N2A | 27398 | 82417;82418;82419 | chr2:178553004;178553003;178553002 | chr2:179417731;179417730;179417729 |
N2B | 20901 | 62926;62927;62928 | chr2:178553004;178553003;178553002 | chr2:179417731;179417730;179417729 |
Novex-1 | 21026 | 63301;63302;63303 | chr2:178553004;178553003;178553002 | chr2:179417731;179417730;179417729 |
Novex-2 | 21093 | 63502;63503;63504 | chr2:178553004;178553003;178553002 | chr2:179417731;179417730;179417729 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs776286853 | -0.388 | 0.794 | N | 0.303 | 0.111 | 0.437741185291 | gnomAD-2.1.1 | 8.1E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
I/M | rs776286853 | -0.388 | 0.794 | N | 0.303 | 0.111 | 0.437741185291 | gnomAD-4.0.0 | 2.05539E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31889E-05 | 1.65695E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2331 | likely_benign | 0.2085 | benign | -0.971 | Destabilizing | 0.061 | N | 0.212 | neutral | None | None | None | None | I |
I/C | 0.5253 | ambiguous | 0.4985 | ambiguous | -0.646 | Destabilizing | 0.94 | D | 0.357 | neutral | None | None | None | None | I |
I/D | 0.6129 | likely_pathogenic | 0.5854 | pathogenic | -0.584 | Destabilizing | 0.418 | N | 0.364 | neutral | None | None | None | None | I |
I/E | 0.4158 | ambiguous | 0.3995 | ambiguous | -0.677 | Destabilizing | 0.418 | N | 0.376 | neutral | None | None | None | None | I |
I/F | 0.1589 | likely_benign | 0.1381 | benign | -0.91 | Destabilizing | 0.523 | D | 0.283 | neutral | N | 0.506936444 | None | None | I |
I/G | 0.4396 | ambiguous | 0.4191 | ambiguous | -1.162 | Destabilizing | 0.228 | N | 0.348 | neutral | None | None | None | None | I |
I/H | 0.2799 | likely_benign | 0.2576 | benign | -0.36 | Destabilizing | 0.94 | D | 0.327 | neutral | None | None | None | None | I |
I/K | 0.1534 | likely_benign | 0.1472 | benign | -0.594 | Destabilizing | 0.418 | N | 0.375 | neutral | None | None | None | None | I |
I/L | 0.0888 | likely_benign | 0.0856 | benign | -0.579 | Destabilizing | 0.047 | N | 0.151 | neutral | N | 0.412908775 | None | None | I |
I/M | 0.0913 | likely_benign | 0.0853 | benign | -0.434 | Destabilizing | 0.794 | D | 0.303 | neutral | N | 0.46778341 | None | None | I |
I/N | 0.1547 | likely_benign | 0.145 | benign | -0.341 | Destabilizing | 0.351 | N | 0.361 | neutral | N | 0.454160751 | None | None | I |
I/P | 0.8608 | likely_pathogenic | 0.8274 | pathogenic | -0.676 | Destabilizing | 0.593 | D | 0.417 | neutral | None | None | None | None | I |
I/Q | 0.2309 | likely_benign | 0.2137 | benign | -0.626 | Destabilizing | 0.836 | D | 0.417 | neutral | None | None | None | None | I |
I/R | 0.1369 | likely_benign | 0.1224 | benign | 0.087 | Stabilizing | 0.418 | N | 0.393 | neutral | None | None | None | None | I |
I/S | 0.164 | likely_benign | 0.1556 | benign | -0.804 | Destabilizing | 0.009 | N | 0.141 | neutral | N | 0.392880219 | None | None | I |
I/T | 0.0943 | likely_benign | 0.0871 | benign | -0.791 | Destabilizing | None | N | 0.117 | neutral | N | 0.338005584 | None | None | I |
I/V | 0.0765 | likely_benign | 0.0736 | benign | -0.676 | Destabilizing | 0.047 | N | 0.163 | neutral | N | 0.466049826 | None | None | I |
I/W | 0.7035 | likely_pathogenic | 0.6689 | pathogenic | -0.892 | Destabilizing | 0.983 | D | 0.32 | neutral | None | None | None | None | I |
I/Y | 0.4114 | ambiguous | 0.3834 | ambiguous | -0.671 | Destabilizing | 0.836 | D | 0.412 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.