Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2999 | 9220;9221;9222 | chr2:178768841;178768840;178768839 | chr2:179633568;179633567;179633566 |
N2AB | 2999 | 9220;9221;9222 | chr2:178768841;178768840;178768839 | chr2:179633568;179633567;179633566 |
N2A | 2999 | 9220;9221;9222 | chr2:178768841;178768840;178768839 | chr2:179633568;179633567;179633566 |
N2B | 2953 | 9082;9083;9084 | chr2:178768841;178768840;178768839 | chr2:179633568;179633567;179633566 |
Novex-1 | 2953 | 9082;9083;9084 | chr2:178768841;178768840;178768839 | chr2:179633568;179633567;179633566 |
Novex-2 | 2953 | 9082;9083;9084 | chr2:178768841;178768840;178768839 | chr2:179633568;179633567;179633566 |
Novex-3 | 2999 | 9220;9221;9222 | chr2:178768841;178768840;178768839 | chr2:179633568;179633567;179633566 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.781 | 0.657 | 0.72559337781 | gnomAD-4.0.0 | 1.59063E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.753 | likely_pathogenic | 0.7365 | pathogenic | -2.74 | Highly Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
Y/C | 0.1825 | likely_benign | 0.2017 | benign | -1.788 | Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.536410317 | None | None | N |
Y/D | 0.9109 | likely_pathogenic | 0.9201 | pathogenic | -2.882 | Highly Destabilizing | 1.0 | D | 0.756 | deleterious | D | 0.536589501 | None | None | N |
Y/E | 0.9679 | likely_pathogenic | 0.9711 | pathogenic | -2.729 | Highly Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
Y/F | 0.1304 | likely_benign | 0.1391 | benign | -1.33 | Destabilizing | 0.999 | D | 0.633 | neutral | N | 0.506546319 | None | None | N |
Y/G | 0.7039 | likely_pathogenic | 0.6663 | pathogenic | -3.076 | Highly Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
Y/H | 0.425 | ambiguous | 0.4814 | ambiguous | -1.604 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | D | 0.536589501 | None | None | N |
Y/I | 0.8633 | likely_pathogenic | 0.8738 | pathogenic | -1.637 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
Y/K | 0.9528 | likely_pathogenic | 0.9596 | pathogenic | -2.13 | Highly Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
Y/L | 0.8295 | likely_pathogenic | 0.8076 | pathogenic | -1.637 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
Y/M | 0.8916 | likely_pathogenic | 0.896 | pathogenic | -1.371 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
Y/N | 0.6796 | likely_pathogenic | 0.7091 | pathogenic | -2.776 | Highly Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.536589501 | None | None | N |
Y/P | 0.9633 | likely_pathogenic | 0.9599 | pathogenic | -2.014 | Highly Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Y/Q | 0.8991 | likely_pathogenic | 0.9179 | pathogenic | -2.619 | Highly Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
Y/R | 0.8782 | likely_pathogenic | 0.8969 | pathogenic | -1.868 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Y/S | 0.4839 | ambiguous | 0.4818 | ambiguous | -3.123 | Highly Destabilizing | 1.0 | D | 0.738 | prob.delet. | N | 0.507134781 | None | None | N |
Y/T | 0.8054 | likely_pathogenic | 0.81 | pathogenic | -2.861 | Highly Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
Y/V | 0.7194 | likely_pathogenic | 0.7267 | pathogenic | -2.014 | Highly Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
Y/W | 0.4829 | ambiguous | 0.5369 | ambiguous | -0.78 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.