Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30003 | 90232;90233;90234 | chr2:178552893;178552892;178552891 | chr2:179417620;179417619;179417618 |
N2AB | 28362 | 85309;85310;85311 | chr2:178552893;178552892;178552891 | chr2:179417620;179417619;179417618 |
N2A | 27435 | 82528;82529;82530 | chr2:178552893;178552892;178552891 | chr2:179417620;179417619;179417618 |
N2B | 20938 | 63037;63038;63039 | chr2:178552893;178552892;178552891 | chr2:179417620;179417619;179417618 |
Novex-1 | 21063 | 63412;63413;63414 | chr2:178552893;178552892;178552891 | chr2:179417620;179417619;179417618 |
Novex-2 | 21130 | 63613;63614;63615 | chr2:178552893;178552892;178552891 | chr2:179417620;179417619;179417618 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs761627535 | -1.364 | 0.055 | N | 0.724 | 0.355 | 0.219573609325 | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | N | None | 0 | 2.03063E-04 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
F/L | rs761627535 | -1.364 | 0.055 | N | 0.724 | 0.355 | 0.219573609325 | gnomAD-4.0.0 | 2.0686E-05 | None | None | None | None | N | None | 0 | 2.05818E-04 | None | 0 | 0 | None | 0 | 0 | 1.14319E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8993 | likely_pathogenic | 0.8731 | pathogenic | -2.751 | Highly Destabilizing | 0.272 | N | 0.832 | deleterious | None | None | None | None | N |
F/C | 0.4762 | ambiguous | 0.4077 | ambiguous | -1.43 | Destabilizing | 0.958 | D | 0.88 | deleterious | N | 0.485254449 | None | None | N |
F/D | 0.9801 | likely_pathogenic | 0.9781 | pathogenic | -3.345 | Highly Destabilizing | 0.726 | D | 0.893 | deleterious | None | None | None | None | N |
F/E | 0.9873 | likely_pathogenic | 0.986 | pathogenic | -3.128 | Highly Destabilizing | 0.726 | D | 0.885 | deleterious | None | None | None | None | N |
F/G | 0.9602 | likely_pathogenic | 0.9535 | pathogenic | -3.193 | Highly Destabilizing | 0.726 | D | 0.86 | deleterious | None | None | None | None | N |
F/H | 0.7813 | likely_pathogenic | 0.7604 | pathogenic | -1.838 | Destabilizing | 0.567 | D | 0.83 | deleterious | None | None | None | None | N |
F/I | 0.5085 | ambiguous | 0.4395 | ambiguous | -1.298 | Destabilizing | 0.22 | N | 0.763 | deleterious | N | 0.466225972 | None | None | N |
F/K | 0.9884 | likely_pathogenic | 0.9868 | pathogenic | -1.936 | Destabilizing | 0.567 | D | 0.89 | deleterious | None | None | None | None | N |
F/L | 0.9405 | likely_pathogenic | 0.9241 | pathogenic | -1.298 | Destabilizing | 0.055 | N | 0.724 | prob.delet. | N | 0.447293494 | None | None | N |
F/M | 0.8196 | likely_pathogenic | 0.7801 | pathogenic | -0.921 | Destabilizing | 0.726 | D | 0.789 | deleterious | None | None | None | None | N |
F/N | 0.8993 | likely_pathogenic | 0.8896 | pathogenic | -2.488 | Highly Destabilizing | 0.726 | D | 0.895 | deleterious | None | None | None | None | N |
F/P | 0.9974 | likely_pathogenic | 0.9969 | pathogenic | -1.796 | Destabilizing | 0.89 | D | 0.889 | deleterious | None | None | None | None | N |
F/Q | 0.9626 | likely_pathogenic | 0.9575 | pathogenic | -2.409 | Highly Destabilizing | 0.726 | D | 0.898 | deleterious | None | None | None | None | N |
F/R | 0.9638 | likely_pathogenic | 0.96 | pathogenic | -1.546 | Destabilizing | 0.567 | D | 0.897 | deleterious | None | None | None | None | N |
F/S | 0.7921 | likely_pathogenic | 0.7525 | pathogenic | -3.031 | Highly Destabilizing | 0.497 | N | 0.842 | deleterious | N | 0.485081091 | None | None | N |
F/T | 0.8813 | likely_pathogenic | 0.8568 | pathogenic | -2.702 | Highly Destabilizing | 0.567 | D | 0.835 | deleterious | None | None | None | None | N |
F/V | 0.4348 | ambiguous | 0.372 | ambiguous | -1.796 | Destabilizing | 0.22 | N | 0.793 | deleterious | N | 0.455451617 | None | None | N |
F/W | 0.5863 | likely_pathogenic | 0.5638 | ambiguous | -0.353 | Destabilizing | 0.726 | D | 0.766 | deleterious | None | None | None | None | N |
F/Y | 0.081 | likely_benign | 0.0844 | benign | -0.747 | Destabilizing | None | N | 0.424 | neutral | N | 0.179838987 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.