Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30012 | 90259;90260;90261 | chr2:178552866;178552865;178552864 | chr2:179417593;179417592;179417591 |
N2AB | 28371 | 85336;85337;85338 | chr2:178552866;178552865;178552864 | chr2:179417593;179417592;179417591 |
N2A | 27444 | 82555;82556;82557 | chr2:178552866;178552865;178552864 | chr2:179417593;179417592;179417591 |
N2B | 20947 | 63064;63065;63066 | chr2:178552866;178552865;178552864 | chr2:179417593;179417592;179417591 |
Novex-1 | 21072 | 63439;63440;63441 | chr2:178552866;178552865;178552864 | chr2:179417593;179417592;179417591 |
Novex-2 | 21139 | 63640;63641;63642 | chr2:178552866;178552865;178552864 | chr2:179417593;179417592;179417591 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs796978396 | None | 0.999 | N | 0.609 | 0.394 | 0.367803931526 | gnomAD-4.0.0 | 3.4211E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49726E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.28 | likely_benign | 0.2495 | benign | -0.492 | Destabilizing | 0.999 | D | 0.606 | neutral | N | 0.512360906 | None | None | I |
E/C | 0.9436 | likely_pathogenic | 0.9347 | pathogenic | -0.183 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/D | 0.2107 | likely_benign | 0.189 | benign | -0.377 | Destabilizing | 0.999 | D | 0.419 | neutral | D | 0.523289976 | None | None | I |
E/F | 0.9327 | likely_pathogenic | 0.9224 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | I |
E/G | 0.3254 | likely_benign | 0.2969 | benign | -0.689 | Destabilizing | 1.0 | D | 0.575 | neutral | N | 0.482046165 | None | None | I |
E/H | 0.6796 | likely_pathogenic | 0.6443 | pathogenic | 0.029 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
E/I | 0.5832 | likely_pathogenic | 0.5685 | pathogenic | -0.003 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
E/K | 0.2161 | likely_benign | 0.1983 | benign | 0.276 | Stabilizing | 0.999 | D | 0.609 | neutral | N | 0.470052924 | None | None | I |
E/L | 0.7067 | likely_pathogenic | 0.6862 | pathogenic | -0.003 | Destabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | I |
E/M | 0.7146 | likely_pathogenic | 0.6856 | pathogenic | 0.069 | Stabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
E/N | 0.4391 | ambiguous | 0.4099 | ambiguous | -0.18 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
E/P | 0.73 | likely_pathogenic | 0.7304 | pathogenic | -0.147 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | I |
E/Q | 0.2295 | likely_benign | 0.2111 | benign | -0.12 | Destabilizing | 1.0 | D | 0.587 | neutral | D | 0.524002052 | None | None | I |
E/R | 0.388 | ambiguous | 0.3716 | ambiguous | 0.516 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/S | 0.3584 | ambiguous | 0.3373 | benign | -0.306 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
E/T | 0.4195 | ambiguous | 0.3852 | ambiguous | -0.134 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | I |
E/V | 0.4081 | ambiguous | 0.3831 | ambiguous | -0.147 | Destabilizing | 1.0 | D | 0.627 | neutral | N | 0.481902169 | None | None | I |
E/W | 0.9778 | likely_pathogenic | 0.9742 | pathogenic | -0.079 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
E/Y | 0.8455 | likely_pathogenic | 0.8276 | pathogenic | -0.028 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.