Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3006390412;90413;90414 chr2:178552713;178552712;178552711chr2:179417440;179417439;179417438
N2AB2842285489;85490;85491 chr2:178552713;178552712;178552711chr2:179417440;179417439;179417438
N2A2749582708;82709;82710 chr2:178552713;178552712;178552711chr2:179417440;179417439;179417438
N2B2099863217;63218;63219 chr2:178552713;178552712;178552711chr2:179417440;179417439;179417438
Novex-12112363592;63593;63594 chr2:178552713;178552712;178552711chr2:179417440;179417439;179417438
Novex-22119063793;63794;63795 chr2:178552713;178552712;178552711chr2:179417440;179417439;179417438
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: T
  • RefSeq wild type transcript codon: ACA
  • RefSeq wild type template codon: TGT
  • Domain: Fn3-107
  • Domain position: 34
  • Structural Position: 36
  • Q(SASA): 0.3414
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
T/I rs770325813 0.062 0.984 N 0.467 0.369 0.441221003447 gnomAD-2.1.1 4.02E-06 None None None None I None 0 0 None 0 0 None 0 None 0 8.86E-06 0
T/I rs770325813 0.062 0.984 N 0.467 0.369 0.441221003447 gnomAD-3.1.2 1.31E-05 None None None None I None 4.83E-05 0 0 0 0 None 0 0 0 0 0
T/I rs770325813 0.062 0.984 N 0.467 0.369 0.441221003447 gnomAD-4.0.0 2.47875E-06 None None None None I None 2.67001E-05 0 None 0 0 None 0 0 1.69522E-06 0 0
T/K None None 0.896 N 0.393 0.376 0.419957187557 gnomAD-4.0.0 6.84199E-07 None None None None I None 0 0 None 0 0 None 0 0 0 1.15931E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
T/A 0.0951 likely_benign 0.0915 benign -0.477 Destabilizing 0.64 D 0.431 neutral N 0.49622467 None None I
T/C 0.3815 ambiguous 0.3631 ambiguous -0.333 Destabilizing 0.999 D 0.486 neutral None None None None I
T/D 0.4397 ambiguous 0.4109 ambiguous 0.131 Stabilizing 0.851 D 0.406 neutral None None None None I
T/E 0.3224 likely_benign 0.314 benign 0.095 Stabilizing 0.919 D 0.397 neutral None None None None I
T/F 0.2732 likely_benign 0.252 benign -0.651 Destabilizing 0.996 D 0.556 neutral None None None None I
T/G 0.2197 likely_benign 0.2021 benign -0.685 Destabilizing 0.702 D 0.478 neutral None None None None I
T/H 0.293 likely_benign 0.2737 benign -0.894 Destabilizing 0.988 D 0.54 neutral None None None None I
T/I 0.1606 likely_benign 0.1599 benign -0.032 Destabilizing 0.984 D 0.467 neutral N 0.475829464 None None I
T/K 0.2093 likely_benign 0.2042 benign -0.568 Destabilizing 0.896 D 0.393 neutral N 0.480246782 None None I
T/L 0.0867 likely_benign 0.0853 benign -0.032 Destabilizing 0.919 D 0.399 neutral None None None None I
T/M 0.089 likely_benign 0.0887 benign 0.056 Stabilizing 0.999 D 0.485 neutral None None None None I
T/N 0.132 likely_benign 0.124 benign -0.358 Destabilizing 0.132 N 0.151 neutral None None None None I
T/P 0.2991 likely_benign 0.259 benign -0.149 Destabilizing 0.984 D 0.455 neutral D 0.534207607 None None I
T/Q 0.242 likely_benign 0.2342 benign -0.532 Destabilizing 0.988 D 0.504 neutral None None None None I
T/R 0.1855 likely_benign 0.1744 benign -0.295 Destabilizing 0.968 D 0.453 neutral N 0.489236458 None None I
T/S 0.1044 likely_benign 0.0998 benign -0.616 Destabilizing 0.046 N 0.077 neutral N 0.47842313 None None I
T/V 0.138 likely_benign 0.1358 benign -0.149 Destabilizing 0.919 D 0.397 neutral None None None None I
T/W 0.5857 likely_pathogenic 0.5465 ambiguous -0.627 Destabilizing 0.999 D 0.671 neutral None None None None I
T/Y 0.3222 likely_benign 0.297 benign -0.387 Destabilizing 0.996 D 0.557 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.