Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30063 | 90412;90413;90414 | chr2:178552713;178552712;178552711 | chr2:179417440;179417439;179417438 |
N2AB | 28422 | 85489;85490;85491 | chr2:178552713;178552712;178552711 | chr2:179417440;179417439;179417438 |
N2A | 27495 | 82708;82709;82710 | chr2:178552713;178552712;178552711 | chr2:179417440;179417439;179417438 |
N2B | 20998 | 63217;63218;63219 | chr2:178552713;178552712;178552711 | chr2:179417440;179417439;179417438 |
Novex-1 | 21123 | 63592;63593;63594 | chr2:178552713;178552712;178552711 | chr2:179417440;179417439;179417438 |
Novex-2 | 21190 | 63793;63794;63795 | chr2:178552713;178552712;178552711 | chr2:179417440;179417439;179417438 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs770325813 | 0.062 | 0.984 | N | 0.467 | 0.369 | 0.441221003447 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
T/I | rs770325813 | 0.062 | 0.984 | N | 0.467 | 0.369 | 0.441221003447 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs770325813 | 0.062 | 0.984 | N | 0.467 | 0.369 | 0.441221003447 | gnomAD-4.0.0 | 2.47875E-06 | None | None | None | None | I | None | 2.67001E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69522E-06 | 0 | 0 |
T/K | None | None | 0.896 | N | 0.393 | 0.376 | 0.419957187557 | gnomAD-4.0.0 | 6.84199E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0951 | likely_benign | 0.0915 | benign | -0.477 | Destabilizing | 0.64 | D | 0.431 | neutral | N | 0.49622467 | None | None | I |
T/C | 0.3815 | ambiguous | 0.3631 | ambiguous | -0.333 | Destabilizing | 0.999 | D | 0.486 | neutral | None | None | None | None | I |
T/D | 0.4397 | ambiguous | 0.4109 | ambiguous | 0.131 | Stabilizing | 0.851 | D | 0.406 | neutral | None | None | None | None | I |
T/E | 0.3224 | likely_benign | 0.314 | benign | 0.095 | Stabilizing | 0.919 | D | 0.397 | neutral | None | None | None | None | I |
T/F | 0.2732 | likely_benign | 0.252 | benign | -0.651 | Destabilizing | 0.996 | D | 0.556 | neutral | None | None | None | None | I |
T/G | 0.2197 | likely_benign | 0.2021 | benign | -0.685 | Destabilizing | 0.702 | D | 0.478 | neutral | None | None | None | None | I |
T/H | 0.293 | likely_benign | 0.2737 | benign | -0.894 | Destabilizing | 0.988 | D | 0.54 | neutral | None | None | None | None | I |
T/I | 0.1606 | likely_benign | 0.1599 | benign | -0.032 | Destabilizing | 0.984 | D | 0.467 | neutral | N | 0.475829464 | None | None | I |
T/K | 0.2093 | likely_benign | 0.2042 | benign | -0.568 | Destabilizing | 0.896 | D | 0.393 | neutral | N | 0.480246782 | None | None | I |
T/L | 0.0867 | likely_benign | 0.0853 | benign | -0.032 | Destabilizing | 0.919 | D | 0.399 | neutral | None | None | None | None | I |
T/M | 0.089 | likely_benign | 0.0887 | benign | 0.056 | Stabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | I |
T/N | 0.132 | likely_benign | 0.124 | benign | -0.358 | Destabilizing | 0.132 | N | 0.151 | neutral | None | None | None | None | I |
T/P | 0.2991 | likely_benign | 0.259 | benign | -0.149 | Destabilizing | 0.984 | D | 0.455 | neutral | D | 0.534207607 | None | None | I |
T/Q | 0.242 | likely_benign | 0.2342 | benign | -0.532 | Destabilizing | 0.988 | D | 0.504 | neutral | None | None | None | None | I |
T/R | 0.1855 | likely_benign | 0.1744 | benign | -0.295 | Destabilizing | 0.968 | D | 0.453 | neutral | N | 0.489236458 | None | None | I |
T/S | 0.1044 | likely_benign | 0.0998 | benign | -0.616 | Destabilizing | 0.046 | N | 0.077 | neutral | N | 0.47842313 | None | None | I |
T/V | 0.138 | likely_benign | 0.1358 | benign | -0.149 | Destabilizing | 0.919 | D | 0.397 | neutral | None | None | None | None | I |
T/W | 0.5857 | likely_pathogenic | 0.5465 | ambiguous | -0.627 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | I |
T/Y | 0.3222 | likely_benign | 0.297 | benign | -0.387 | Destabilizing | 0.996 | D | 0.557 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.