Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30067 | 90424;90425;90426 | chr2:178552701;178552700;178552699 | chr2:179417428;179417427;179417426 |
N2AB | 28426 | 85501;85502;85503 | chr2:178552701;178552700;178552699 | chr2:179417428;179417427;179417426 |
N2A | 27499 | 82720;82721;82722 | chr2:178552701;178552700;178552699 | chr2:179417428;179417427;179417426 |
N2B | 21002 | 63229;63230;63231 | chr2:178552701;178552700;178552699 | chr2:179417428;179417427;179417426 |
Novex-1 | 21127 | 63604;63605;63606 | chr2:178552701;178552700;178552699 | chr2:179417428;179417427;179417426 |
Novex-2 | 21194 | 63805;63806;63807 | chr2:178552701;178552700;178552699 | chr2:179417428;179417427;179417426 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs747129423 | -0.118 | 0.004 | N | 0.215 | 0.12 | 0.389126455913 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/I | rs747129423 | -0.118 | 0.004 | N | 0.215 | 0.12 | 0.389126455913 | gnomAD-4.0.0 | 1.59104E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02334E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4698 | ambiguous | 0.3745 | ambiguous | -2.291 | Highly Destabilizing | 0.78 | D | 0.613 | neutral | D | 0.530779291 | None | None | N |
V/C | 0.9184 | likely_pathogenic | 0.8969 | pathogenic | -1.798 | Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
V/D | 0.9968 | likely_pathogenic | 0.995 | pathogenic | -3.329 | Highly Destabilizing | 0.996 | D | 0.86 | deleterious | None | None | None | None | N |
V/E | 0.9895 | likely_pathogenic | 0.9852 | pathogenic | -3.035 | Highly Destabilizing | 0.995 | D | 0.806 | deleterious | D | 0.542896065 | None | None | N |
V/F | 0.7483 | likely_pathogenic | 0.6821 | pathogenic | -1.332 | Destabilizing | 0.976 | D | 0.714 | prob.delet. | None | None | None | None | N |
V/G | 0.8559 | likely_pathogenic | 0.8034 | pathogenic | -2.884 | Highly Destabilizing | 0.995 | D | 0.811 | deleterious | D | 0.542896065 | None | None | N |
V/H | 0.9959 | likely_pathogenic | 0.9939 | pathogenic | -2.813 | Highly Destabilizing | 0.999 | D | 0.864 | deleterious | None | None | None | None | N |
V/I | 0.0901 | likely_benign | 0.0824 | benign | -0.584 | Destabilizing | 0.004 | N | 0.215 | neutral | N | 0.43459913 | None | None | N |
V/K | 0.9927 | likely_pathogenic | 0.9903 | pathogenic | -2.071 | Highly Destabilizing | 0.988 | D | 0.809 | deleterious | None | None | None | None | N |
V/L | 0.4436 | ambiguous | 0.3873 | ambiguous | -0.584 | Destabilizing | 0.437 | N | 0.362 | neutral | N | 0.505560725 | None | None | N |
V/M | 0.5358 | ambiguous | 0.4454 | ambiguous | -0.727 | Destabilizing | 0.976 | D | 0.642 | neutral | None | None | None | None | N |
V/N | 0.9902 | likely_pathogenic | 0.9845 | pathogenic | -2.658 | Highly Destabilizing | 0.996 | D | 0.866 | deleterious | None | None | None | None | N |
V/P | 0.9837 | likely_pathogenic | 0.9787 | pathogenic | -1.131 | Destabilizing | 0.996 | D | 0.839 | deleterious | None | None | None | None | N |
V/Q | 0.9865 | likely_pathogenic | 0.9808 | pathogenic | -2.354 | Highly Destabilizing | 0.996 | D | 0.854 | deleterious | None | None | None | None | N |
V/R | 0.9841 | likely_pathogenic | 0.9796 | pathogenic | -2.038 | Highly Destabilizing | 0.996 | D | 0.869 | deleterious | None | None | None | None | N |
V/S | 0.9044 | likely_pathogenic | 0.8592 | pathogenic | -3.189 | Highly Destabilizing | 0.988 | D | 0.769 | deleterious | None | None | None | None | N |
V/T | 0.6201 | likely_pathogenic | 0.5295 | ambiguous | -2.744 | Highly Destabilizing | 0.919 | D | 0.588 | neutral | None | None | None | None | N |
V/W | 0.9933 | likely_pathogenic | 0.9901 | pathogenic | -1.987 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
V/Y | 0.9795 | likely_pathogenic | 0.9701 | pathogenic | -1.599 | Destabilizing | 0.996 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.