Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30089 | 90490;90491;90492 | chr2:178552635;178552634;178552633 | chr2:179417362;179417361;179417360 |
N2AB | 28448 | 85567;85568;85569 | chr2:178552635;178552634;178552633 | chr2:179417362;179417361;179417360 |
N2A | 27521 | 82786;82787;82788 | chr2:178552635;178552634;178552633 | chr2:179417362;179417361;179417360 |
N2B | 21024 | 63295;63296;63297 | chr2:178552635;178552634;178552633 | chr2:179417362;179417361;179417360 |
Novex-1 | 21149 | 63670;63671;63672 | chr2:178552635;178552634;178552633 | chr2:179417362;179417361;179417360 |
Novex-2 | 21216 | 63871;63872;63873 | chr2:178552635;178552634;178552633 | chr2:179417362;179417361;179417360 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1290870091 | None | 0.674 | N | 0.473 | 0.087 | 0.272205846399 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1290870091 | None | 0.674 | N | 0.473 | 0.087 | 0.272205846399 | gnomAD-4.0.0 | 1.59104E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02371E-05 |
E/K | rs377281790 | None | 0.674 | N | 0.514 | 0.194 | 0.302793454619 | gnomAD-4.0.0 | 3.42083E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15937E-05 | 6.62581E-05 |
E/Q | None | None | 0.957 | N | 0.567 | 0.235 | 0.361160317528 | gnomAD-4.0.0 | 6.84167E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1292 | likely_benign | 0.1236 | benign | -0.734 | Destabilizing | 0.338 | N | 0.586 | neutral | N | 0.450179084 | None | None | N |
E/C | 0.7389 | likely_pathogenic | 0.7385 | pathogenic | -0.192 | Destabilizing | 0.991 | D | 0.782 | deleterious | None | None | None | None | N |
E/D | 0.2167 | likely_benign | 0.2059 | benign | -0.476 | Destabilizing | 0.674 | D | 0.473 | neutral | N | 0.47478674 | None | None | N |
E/F | 0.6971 | likely_pathogenic | 0.6934 | pathogenic | -0.368 | Destabilizing | 0.826 | D | 0.777 | deleterious | None | None | None | None | N |
E/G | 0.2446 | likely_benign | 0.224 | benign | -0.976 | Destabilizing | 0.879 | D | 0.661 | neutral | N | 0.49441265 | None | None | N |
E/H | 0.4238 | ambiguous | 0.404 | ambiguous | -0.226 | Destabilizing | 0.991 | D | 0.576 | neutral | None | None | None | None | N |
E/I | 0.2362 | likely_benign | 0.2355 | benign | -0.105 | Destabilizing | 0.01 | N | 0.458 | neutral | None | None | None | None | N |
E/K | 0.1604 | likely_benign | 0.1537 | benign | 0.243 | Stabilizing | 0.674 | D | 0.514 | neutral | N | 0.431977325 | None | None | N |
E/L | 0.3048 | likely_benign | 0.2982 | benign | -0.105 | Destabilizing | 0.189 | N | 0.646 | neutral | None | None | None | None | N |
E/M | 0.3324 | likely_benign | 0.3353 | benign | 0.128 | Stabilizing | 0.947 | D | 0.777 | deleterious | None | None | None | None | N |
E/N | 0.2893 | likely_benign | 0.2801 | benign | -0.333 | Destabilizing | 0.967 | D | 0.584 | neutral | None | None | None | None | N |
E/P | 0.6156 | likely_pathogenic | 0.6017 | pathogenic | -0.295 | Destabilizing | 0.967 | D | 0.706 | prob.neutral | None | None | None | None | N |
E/Q | 0.129 | likely_benign | 0.1236 | benign | -0.262 | Destabilizing | 0.957 | D | 0.567 | neutral | N | 0.454680826 | None | None | N |
E/R | 0.2696 | likely_benign | 0.2609 | benign | 0.46 | Stabilizing | 0.906 | D | 0.578 | neutral | None | None | None | None | N |
E/S | 0.1978 | likely_benign | 0.1971 | benign | -0.482 | Destabilizing | 0.733 | D | 0.521 | neutral | None | None | None | None | N |
E/T | 0.1435 | likely_benign | 0.1463 | benign | -0.266 | Destabilizing | 0.575 | D | 0.613 | neutral | None | None | None | None | N |
E/V | 0.1399 | likely_benign | 0.1411 | benign | -0.295 | Destabilizing | 0.003 | N | 0.392 | neutral | N | 0.401809134 | None | None | N |
E/W | 0.905 | likely_pathogenic | 0.9014 | pathogenic | -0.083 | Destabilizing | 0.991 | D | 0.763 | deleterious | None | None | None | None | N |
E/Y | 0.6384 | likely_pathogenic | 0.6227 | pathogenic | -0.091 | Destabilizing | 0.906 | D | 0.78 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.