Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3010 | 9253;9254;9255 | chr2:178768808;178768807;178768806 | chr2:179633535;179633534;179633533 |
N2AB | 3010 | 9253;9254;9255 | chr2:178768808;178768807;178768806 | chr2:179633535;179633534;179633533 |
N2A | 3010 | 9253;9254;9255 | chr2:178768808;178768807;178768806 | chr2:179633535;179633534;179633533 |
N2B | 2964 | 9115;9116;9117 | chr2:178768808;178768807;178768806 | chr2:179633535;179633534;179633533 |
Novex-1 | 2964 | 9115;9116;9117 | chr2:178768808;178768807;178768806 | chr2:179633535;179633534;179633533 |
Novex-2 | 2964 | 9115;9116;9117 | chr2:178768808;178768807;178768806 | chr2:179633535;179633534;179633533 |
Novex-3 | 3010 | 9253;9254;9255 | chr2:178768808;178768807;178768806 | chr2:179633535;179633534;179633533 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 1.0 | N | 0.687 | 0.619 | 0.311387274539 | gnomAD-4.0.0 | 1.5906E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85647E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.123 | likely_benign | 0.1185 | benign | -0.228 | Destabilizing | 0.997 | D | 0.394 | neutral | N | 0.491714049 | None | None | N |
S/C | 0.3282 | likely_benign | 0.3559 | ambiguous | -0.145 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/D | 0.7367 | likely_pathogenic | 0.7605 | pathogenic | 0.033 | Stabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
S/E | 0.8454 | likely_pathogenic | 0.8517 | pathogenic | -0.072 | Destabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | N |
S/F | 0.5585 | ambiguous | 0.5684 | pathogenic | -0.879 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
S/G | 0.1609 | likely_benign | 0.1607 | benign | -0.316 | Destabilizing | 0.999 | D | 0.479 | neutral | None | None | None | None | N |
S/H | 0.6966 | likely_pathogenic | 0.7306 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
S/I | 0.4592 | ambiguous | 0.4488 | ambiguous | -0.128 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
S/K | 0.9374 | likely_pathogenic | 0.9475 | pathogenic | -0.423 | Destabilizing | 0.999 | D | 0.556 | neutral | None | None | None | None | N |
S/L | 0.231 | likely_benign | 0.2224 | benign | -0.128 | Destabilizing | 1.0 | D | 0.607 | neutral | N | 0.519543168 | None | None | N |
S/M | 0.3411 | ambiguous | 0.3611 | ambiguous | 0.096 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/N | 0.2337 | likely_benign | 0.2369 | benign | -0.075 | Destabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | N |
S/P | 0.2127 | likely_benign | 0.2086 | benign | -0.134 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.424740413 | None | None | N |
S/Q | 0.7914 | likely_pathogenic | 0.7991 | pathogenic | -0.342 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/R | 0.9187 | likely_pathogenic | 0.9296 | pathogenic | -0.184 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
S/T | 0.1699 | likely_benign | 0.1635 | benign | -0.181 | Destabilizing | 0.999 | D | 0.447 | neutral | N | 0.513697889 | None | None | N |
S/V | 0.4434 | ambiguous | 0.4336 | ambiguous | -0.134 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
S/W | 0.6909 | likely_pathogenic | 0.7151 | pathogenic | -0.929 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
S/Y | 0.4233 | ambiguous | 0.4577 | ambiguous | -0.632 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.