Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30100 | 90523;90524;90525 | chr2:178552602;178552601;178552600 | chr2:179417329;179417328;179417327 |
N2AB | 28459 | 85600;85601;85602 | chr2:178552602;178552601;178552600 | chr2:179417329;179417328;179417327 |
N2A | 27532 | 82819;82820;82821 | chr2:178552602;178552601;178552600 | chr2:179417329;179417328;179417327 |
N2B | 21035 | 63328;63329;63330 | chr2:178552602;178552601;178552600 | chr2:179417329;179417328;179417327 |
Novex-1 | 21160 | 63703;63704;63705 | chr2:178552602;178552601;178552600 | chr2:179417329;179417328;179417327 |
Novex-2 | 21227 | 63904;63905;63906 | chr2:178552602;178552601;178552600 | chr2:179417329;179417328;179417327 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs762287310 | 0.322 | 0.852 | N | 0.567 | 0.264 | 0.246773566709 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
E/K | rs762287310 | 0.322 | 0.852 | N | 0.567 | 0.264 | 0.246773566709 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs762287310 | 0.322 | 0.852 | N | 0.567 | 0.264 | 0.246773566709 | gnomAD-4.0.0 | 6.57229E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47011E-05 | 0 | 0 |
E/Q | rs762287310 | None | 0.31 | N | 0.299 | 0.202 | 0.242825505644 | gnomAD-4.0.0 | 1.36837E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79886E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2787 | likely_benign | 0.2409 | benign | -0.418 | Destabilizing | 0.92 | D | 0.533 | neutral | N | 0.444735978 | None | None | N |
E/C | 0.8461 | likely_pathogenic | 0.8384 | pathogenic | -0.027 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
E/D | 0.2516 | likely_benign | 0.1964 | benign | -1.381 | Destabilizing | 0.035 | N | 0.32 | neutral | N | 0.481888857 | None | None | N |
E/F | 0.7456 | likely_pathogenic | 0.6849 | pathogenic | 0.208 | Stabilizing | 0.964 | D | 0.614 | neutral | None | None | None | None | N |
E/G | 0.4503 | ambiguous | 0.387 | ambiguous | -0.903 | Destabilizing | 0.959 | D | 0.524 | neutral | N | 0.514385278 | None | None | N |
E/H | 0.5872 | likely_pathogenic | 0.5184 | ambiguous | -0.016 | Destabilizing | 0.982 | D | 0.533 | neutral | None | None | None | None | N |
E/I | 0.4101 | ambiguous | 0.3918 | ambiguous | 0.949 | Stabilizing | 0.991 | D | 0.611 | neutral | None | None | None | None | N |
E/K | 0.5162 | ambiguous | 0.4753 | ambiguous | -0.537 | Destabilizing | 0.852 | D | 0.567 | neutral | N | 0.442522393 | None | None | N |
E/L | 0.5 | ambiguous | 0.4633 | ambiguous | 0.949 | Stabilizing | 0.939 | D | 0.527 | neutral | None | None | None | None | N |
E/M | 0.5285 | ambiguous | 0.5055 | ambiguous | 1.55 | Stabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
E/N | 0.4778 | ambiguous | 0.4043 | ambiguous | -1.103 | Destabilizing | 0.939 | D | 0.493 | neutral | None | None | None | None | N |
E/P | 0.9783 | likely_pathogenic | 0.97 | pathogenic | 0.514 | Stabilizing | 0.997 | D | 0.535 | neutral | None | None | None | None | N |
E/Q | 0.2129 | likely_benign | 0.1918 | benign | -0.745 | Destabilizing | 0.31 | N | 0.299 | neutral | N | 0.411180765 | None | None | N |
E/R | 0.6108 | likely_pathogenic | 0.5625 | ambiguous | -0.507 | Destabilizing | 0.939 | D | 0.503 | neutral | None | None | None | None | N |
E/S | 0.3399 | likely_benign | 0.2904 | benign | -1.65 | Destabilizing | 0.939 | D | 0.543 | neutral | None | None | None | None | N |
E/T | 0.3284 | likely_benign | 0.3009 | benign | -1.198 | Destabilizing | 0.969 | D | 0.471 | neutral | None | None | None | None | N |
E/V | 0.272 | likely_benign | 0.2554 | benign | 0.514 | Stabilizing | 0.92 | D | 0.542 | neutral | N | 0.435423062 | None | None | N |
E/W | 0.9202 | likely_pathogenic | 0.896 | pathogenic | 0.175 | Stabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
E/Y | 0.6584 | likely_pathogenic | 0.5798 | pathogenic | 0.459 | Stabilizing | 0.321 | N | 0.546 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.