Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30143 | 90652;90653;90654 | chr2:178552473;178552472;178552471 | chr2:179417200;179417199;179417198 |
N2AB | 28502 | 85729;85730;85731 | chr2:178552473;178552472;178552471 | chr2:179417200;179417199;179417198 |
N2A | 27575 | 82948;82949;82950 | chr2:178552473;178552472;178552471 | chr2:179417200;179417199;179417198 |
N2B | 21078 | 63457;63458;63459 | chr2:178552473;178552472;178552471 | chr2:179417200;179417199;179417198 |
Novex-1 | 21203 | 63832;63833;63834 | chr2:178552473;178552472;178552471 | chr2:179417200;179417199;179417198 |
Novex-2 | 21270 | 64033;64034;64035 | chr2:178552473;178552472;178552471 | chr2:179417200;179417199;179417198 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1287481084 | -0.312 | 0.997 | D | 0.502 | 0.526 | 0.741963092889 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/L | rs1287481084 | -0.312 | 0.997 | D | 0.502 | 0.526 | 0.741963092889 | gnomAD-4.0.0 | 6.85653E-07 | None | None | None | None | I | None | 2.99168E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3962 | ambiguous | 0.3434 | ambiguous | -1.1 | Destabilizing | 0.999 | D | 0.466 | neutral | N | 0.468608208 | None | None | I |
V/C | 0.8563 | likely_pathogenic | 0.8123 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | I |
V/D | 0.9685 | likely_pathogenic | 0.9522 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
V/E | 0.9073 | likely_pathogenic | 0.8704 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.66 | neutral | N | 0.517735281 | None | None | I |
V/F | 0.622 | likely_pathogenic | 0.5516 | ambiguous | -0.987 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
V/G | 0.6297 | likely_pathogenic | 0.5617 | ambiguous | -1.354 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | N | 0.512708851 | None | None | I |
V/H | 0.9708 | likely_pathogenic | 0.9532 | pathogenic | -0.947 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | I |
V/I | 0.1106 | likely_benign | 0.1064 | benign | -0.536 | Destabilizing | 0.998 | D | 0.509 | neutral | None | None | None | None | I |
V/K | 0.9226 | likely_pathogenic | 0.8854 | pathogenic | -0.908 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
V/L | 0.5361 | ambiguous | 0.4648 | ambiguous | -0.536 | Destabilizing | 0.997 | D | 0.502 | neutral | D | 0.537508146 | None | None | I |
V/M | 0.3877 | ambiguous | 0.3228 | benign | -0.407 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.517228302 | None | None | I |
V/N | 0.8963 | likely_pathogenic | 0.859 | pathogenic | -0.604 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/P | 0.98 | likely_pathogenic | 0.978 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
V/Q | 0.8677 | likely_pathogenic | 0.8183 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | I |
V/R | 0.8962 | likely_pathogenic | 0.856 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
V/S | 0.6477 | likely_pathogenic | 0.5736 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
V/T | 0.4773 | ambiguous | 0.3971 | ambiguous | -1.029 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | I |
V/W | 0.991 | likely_pathogenic | 0.9856 | pathogenic | -1.125 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
V/Y | 0.9472 | likely_pathogenic | 0.921 | pathogenic | -0.833 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.