Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30169 | 90730;90731;90732 | chr2:178552395;178552394;178552393 | chr2:179417122;179417121;179417120 |
N2AB | 28528 | 85807;85808;85809 | chr2:178552395;178552394;178552393 | chr2:179417122;179417121;179417120 |
N2A | 27601 | 83026;83027;83028 | chr2:178552395;178552394;178552393 | chr2:179417122;179417121;179417120 |
N2B | 21104 | 63535;63536;63537 | chr2:178552395;178552394;178552393 | chr2:179417122;179417121;179417120 |
Novex-1 | 21229 | 63910;63911;63912 | chr2:178552395;178552394;178552393 | chr2:179417122;179417121;179417120 |
Novex-2 | 21296 | 64111;64112;64113 | chr2:178552395;178552394;178552393 | chr2:179417122;179417121;179417120 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs775893072 | -0.72 | 0.001 | N | 0.215 | 0.206 | None | gnomAD-2.1.1 | 3.41E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.45E-05 | 0 |
G/D | rs775893072 | -0.72 | 0.001 | N | 0.215 | 0.206 | None | gnomAD-4.0.0 | 9.03258E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.09214E-05 | 0 | 1.68623E-05 |
G/V | None | None | 0.627 | N | 0.512 | 0.24 | 0.531825494424 | gnomAD-4.0.0 | 6.94814E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.1012E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1689 | likely_benign | 0.1879 | benign | -0.291 | Destabilizing | 0.09 | N | 0.347 | neutral | N | 0.50716573 | None | None | N |
G/C | 0.2021 | likely_benign | 0.2565 | benign | -0.888 | Destabilizing | 0.928 | D | 0.477 | neutral | N | 0.481128474 | None | None | N |
G/D | 0.128 | likely_benign | 0.1499 | benign | -0.504 | Destabilizing | 0.001 | N | 0.215 | neutral | N | 0.432627899 | None | None | N |
G/E | 0.1876 | likely_benign | 0.222 | benign | -0.645 | Destabilizing | 0.241 | N | 0.35 | neutral | None | None | None | None | N |
G/F | 0.5959 | likely_pathogenic | 0.6372 | pathogenic | -0.884 | Destabilizing | 0.818 | D | 0.474 | neutral | None | None | None | None | N |
G/H | 0.3184 | likely_benign | 0.3648 | ambiguous | -0.507 | Destabilizing | 0.69 | D | 0.425 | neutral | None | None | None | None | N |
G/I | 0.3697 | ambiguous | 0.3977 | ambiguous | -0.345 | Destabilizing | 0.69 | D | 0.489 | neutral | None | None | None | None | N |
G/K | 0.4224 | ambiguous | 0.4415 | ambiguous | -0.894 | Destabilizing | 0.241 | N | 0.395 | neutral | None | None | None | None | N |
G/L | 0.4438 | ambiguous | 0.5144 | ambiguous | -0.345 | Destabilizing | 0.388 | N | 0.51 | neutral | None | None | None | None | N |
G/M | 0.4513 | ambiguous | 0.5118 | ambiguous | -0.481 | Destabilizing | 0.981 | D | 0.463 | neutral | None | None | None | None | N |
G/N | 0.1293 | likely_benign | 0.1504 | benign | -0.57 | Destabilizing | 0.001 | N | 0.121 | neutral | None | None | None | None | N |
G/P | 0.9139 | likely_pathogenic | 0.912 | pathogenic | -0.292 | Destabilizing | 0.818 | D | 0.449 | neutral | None | None | None | None | N |
G/Q | 0.2637 | likely_benign | 0.3035 | benign | -0.811 | Destabilizing | 0.69 | D | 0.453 | neutral | None | None | None | None | N |
G/R | 0.3421 | ambiguous | 0.3543 | ambiguous | -0.457 | Destabilizing | 0.627 | D | 0.459 | neutral | N | 0.520729673 | None | None | N |
G/S | 0.0874 | likely_benign | 0.0963 | benign | -0.745 | Destabilizing | 0.001 | N | 0.161 | neutral | N | 0.51555314 | None | None | N |
G/T | 0.1673 | likely_benign | 0.1927 | benign | -0.808 | Destabilizing | 0.241 | N | 0.373 | neutral | None | None | None | None | N |
G/V | 0.2939 | likely_benign | 0.3334 | benign | -0.292 | Destabilizing | 0.627 | D | 0.512 | neutral | N | 0.481128474 | None | None | N |
G/W | 0.5129 | ambiguous | 0.5872 | pathogenic | -1.075 | Destabilizing | 0.981 | D | 0.507 | neutral | None | None | None | None | N |
G/Y | 0.4037 | ambiguous | 0.4647 | ambiguous | -0.719 | Destabilizing | 0.818 | D | 0.474 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.